Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G067700.1 | Wheat | cytosol | 91.55 | 91.55 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 91.27 | 91.4 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 57.06 | 90.35 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 77.42 | 78.07 |
| OQU91407 | Sorghum | nucleus | 52.49 | 55.25 |
| KXG38064 | Sorghum | nucleus | 54.16 | 54.31 |
| OQU91406 | Sorghum | nucleus | 55.68 | 53.74 |
| Zm00001d033166_P001 | Maize | nucleus | 54.29 | 53.55 |
| EER91260 | Sorghum | nucleus | 53.19 | 53.26 |
| Solyc04g011630.1.1 | Tomato | cytosol | 11.77 | 50.0 |
| CDX68389 | Canola | cytosol | 5.68 | 48.24 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 26.32 | 42.99 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 18.7 | 42.59 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 18.56 | 42.27 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 22.58 | 40.25 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 27.42 | 39.76 |
| PGSC0003DMT400005480 | Potato | cytosol | 26.04 | 38.6 |
| CDY71578 | Canola | nucleus, plastid | 27.84 | 38.58 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 20.5 | 37.76 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 36.84 | 37.68 |
| PGSC0003DMT400049420 | Potato | cytosol | 34.35 | 37.35 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 35.87 | 36.53 |
| Bra015584.1-P | Field mustard | cytosol | 21.88 | 36.24 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 30.06 | 36.17 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 36.01 | 36.06 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 32.69 | 36.03 |
| KRH10240 | Soybean | cytosol | 29.78 | 35.48 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 31.44 | 35.14 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 30.61 | 35.08 |
| Bra028391.1-P | Field mustard | nucleus | 30.06 | 35.0 |
| CDY47877 | Canola | nucleus | 29.92 | 34.95 |
| PGSC0003DMT400016258 | Potato | cytosol | 35.18 | 34.89 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 29.36 | 34.64 |
| CDY39530 | Canola | cytosol | 29.64 | 34.57 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 36.98 | 34.41 |
| KRH65839 | Soybean | cytosol, plastid | 34.76 | 34.38 |
| CDY33040 | Canola | nucleus | 28.39 | 34.34 |
| Solyc05g053090.1.1 | Tomato | cytosol | 35.32 | 34.32 |
| PGSC0003DMT400069949 | Potato | cytosol | 35.46 | 34.27 |
| KRH24780 | Soybean | cytosol | 31.3 | 34.24 |
| KRH29773 | Soybean | cytosol | 29.09 | 34.2 |
| Solyc10g086530.1.1 | Tomato | cytosol | 36.01 | 34.17 |
| CDY47878 | Canola | nucleus | 32.55 | 34.01 |
| CDX79750 | Canola | peroxisome | 31.72 | 33.98 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 31.58 | 33.88 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 31.58 | 33.88 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 35.04 | 33.82 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 35.6 | 33.77 |
| Solyc09g010920.1.1 | Tomato | cytosol | 35.6 | 33.77 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 30.75 | 33.74 |
| AT3G46600.1 | Thale cress | cytosol | 27.15 | 33.62 |
| Bra028390.1-P | Field mustard | cytosol | 32.83 | 33.57 |
| KRH49113 | Soybean | cytosol | 34.07 | 33.52 |
| KRG99969 | Soybean | cytosol | 34.21 | 33.51 |
| Bra033813.1-P | Field mustard | nucleus | 27.01 | 33.51 |
| KRH23094 | Soybean | cytosol | 25.62 | 33.45 |
| AT5G59450.1 | Thale cress | nucleus | 28.25 | 33.44 |
| CDX86475 | Canola | nucleus | 32.83 | 33.38 |
| CDX77228 | Canola | cytosol | 31.02 | 33.33 |
| KRH24773 | Soybean | nucleus | 31.72 | 33.33 |
| Solyc01g100200.2.1 | Tomato | nucleus | 30.75 | 33.33 |
| KRH29774 | Soybean | cytosol | 29.09 | 33.28 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 32.96 | 33.1 |
| KRH23095 | Soybean | cytosol | 30.06 | 33.03 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 34.63 | 32.89 |
| AT2G37650.1 | Thale cress | cytosol | 32.69 | 32.87 |
| AT2G29060.1 | Thale cress | cytosol | 31.58 | 32.85 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 31.99 | 32.81 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 32.96 | 32.74 |
| KRH29771 | Soybean | cytosol | 30.75 | 32.65 |
| Solyc06g082530.1.1 | Tomato | cytosol | 29.5 | 32.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.64 | 32.47 |
| CDX82987 | Canola | nucleus | 27.01 | 32.45 |
| CDY06266 | Canola | cytosol | 28.39 | 32.44 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 33.8 | 32.36 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 28.81 | 32.35 |
| CDY15616 | Canola | nucleus | 31.99 | 32.31 |
| Bra035653.1-P | Field mustard | cytosol | 32.13 | 32.13 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 26.87 | 32.12 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 28.81 | 32.05 |
| Bra030688.1-P | Field mustard | nucleus | 32.96 | 32.03 |
| CDY31749 | Canola | cytosol | 32.13 | 31.96 |
| KRH29775 | Soybean | nucleus | 29.78 | 31.95 |
| PGSC0003DMT400078286 | Potato | nucleus | 29.5 | 31.93 |
| KRH24775 | Soybean | cytosol | 30.06 | 31.91 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 34.63 | 31.65 |
| Solyc06g076280.1.1 | Tomato | cytosol | 32.55 | 31.42 |
| KRH24778 | Soybean | nucleus | 29.36 | 31.36 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 32.27 | 31.36 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 29.22 | 31.26 |
| KRH23089 | Soybean | cytosol | 27.84 | 31.21 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 29.64 | 31.1 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 27.7 | 31.1 |
| PGSC0003DMT400077972 | Potato | cytosol | 32.27 | 30.98 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 21.19 | 30.72 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 31.58 | 30.65 |
| KRH29779 | Soybean | cytosol | 31.44 | 30.59 |
| Bra031581.1-P | Field mustard | cytosol | 28.25 | 30.54 |
| KRH23090 | Soybean | vacuole | 26.18 | 30.43 |
| Bra031580.1-P | Field mustard | cytosol | 28.95 | 30.29 |
| CDY06265 | Canola | cytosol | 28.81 | 30.14 |
| KRH10243 | Soybean | nucleus | 27.7 | 30.08 |
| AT1G07530.1 | Thale cress | cytosol | 31.99 | 30.04 |
| AT1G07520.3 | Thale cress | cytosol | 28.81 | 29.89 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 27.56 | 29.84 |
| CDX68388 | Canola | cytosol | 16.9 | 29.47 |
| CDY09912 | Canola | cytosol | 28.39 | 29.29 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 29.78 | 28.74 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 31.72 | 28.73 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 16.9 | 28.64 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 29.64 | 26.68 |
| CDY09911 | Canola | nucleus | 21.19 | 26.2 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 17.04 | 24.55 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 18.56 | 24.19 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 16.76 | 21.92 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 14.68 | 21.68 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 16.48 | 20.88 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 13.99 | 16.01 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G067900.1 | EnsemblPlantsGene:TraesCS3A01G067900 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF60 |
| PFAM:PF03514 | PFscan:PS50985 | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:40859116..40861284
Molecular Weight (calculated)
81910.7 Da
IEP (calculated)
7.385
GRAVY (calculated)
-0.450
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTSDKPSTA DFHGIMANTA GCGAYCSEDF VESSTAKYND SDFILHPPNP MSYYPELSIA SNKIDPQFCN VSCDDTSAGW CLTSVAEHPR TDSDVTLSYI
101: EQMLMQDIDD KVRAPHGETA IRSMEEPFYE LLGQKYPVLP YLLPLCGCGR LENLNGNVSR LDGQLCCNCS VYISSDDYHP NENSQASQAP WTLSAIVGEA
201: KQFPLGAERM EIGLNINGLS IAKKPSRDYH SPHMNDIDTM KDASFEVRGR KVYPGIEELD LLEGRRNKQI AFSSDEPTRN EAFDKVLLCS DQKPIGEGII
301: SQQTMADTYT KYAHKDHGRK PSRQTTRGKA RKKKEVVDLR TLLIHCAQAV SVNNHSLASG ILKSIRQHSS PSGDDTQRLA FYLADCLEIR LSGNGSQINR
401: NFITTPRSAA YILKLFHLCF TVSHYLRSSY YFSNKTILDV SKGKSQVHII DFGICFGFQW PSLLKQLADR EGGPPKLRIT GIELPMPGFW PDGRKNNTQL
501: RLVEYAGMFK VPLKYRQISS KWESISIEDL NINKGEVLIV NCINRMKNIA DETISINSAR NRVLNTIKMM KPKVFIHGVV NGYYNTPFFL SRFKEVMHHY
601: ASLFDMLDKT TPRDNEARLI LERDIYKYEM LNVIACEGSE RIERPESYKT WKLRSLRARF EQLPLNPKIV QGIQHIVRQI YHKDLFVDEE DQFLVLGWKG
701: RIVYALSTWK PSESNNEGTD DI
101: EQMLMQDIDD KVRAPHGETA IRSMEEPFYE LLGQKYPVLP YLLPLCGCGR LENLNGNVSR LDGQLCCNCS VYISSDDYHP NENSQASQAP WTLSAIVGEA
201: KQFPLGAERM EIGLNINGLS IAKKPSRDYH SPHMNDIDTM KDASFEVRGR KVYPGIEELD LLEGRRNKQI AFSSDEPTRN EAFDKVLLCS DQKPIGEGII
301: SQQTMADTYT KYAHKDHGRK PSRQTTRGKA RKKKEVVDLR TLLIHCAQAV SVNNHSLASG ILKSIRQHSS PSGDDTQRLA FYLADCLEIR LSGNGSQINR
401: NFITTPRSAA YILKLFHLCF TVSHYLRSSY YFSNKTILDV SKGKSQVHII DFGICFGFQW PSLLKQLADR EGGPPKLRIT GIELPMPGFW PDGRKNNTQL
501: RLVEYAGMFK VPLKYRQISS KWESISIEDL NINKGEVLIV NCINRMKNIA DETISINSAR NRVLNTIKMM KPKVFIHGVV NGYYNTPFFL SRFKEVMHHY
601: ASLFDMLDKT TPRDNEARLI LERDIYKYEM LNVIACEGSE RIERPESYKT WKLRSLRARF EQLPLNPKIV QGIQHIVRQI YHKDLFVDEE DQFLVLGWKG
701: RIVYALSTWK PSESNNEGTD DI
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.