Factsheet for Bra015584.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G07520.3	Thale cress	cytosol	76.61	47.99
Bra031580.1-P	Field mustard	cytosol	75.0	47.39
Bra031581.1-P	Field mustard	cytosol	72.02	47.01
Bra028391.1-P	Field mustard	nucleus	60.09	42.26
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	27.29	37.54
PGSC0003DMT400005480	Potato	cytosol	41.74	37.37
HORVU3Hr1G012520.1	Barley	cytosol	36.7	35.09
KRH29773	Soybean	cytosol	46.56	33.06
GSMUA_Achr10P...	Banana	nucleus	33.49	33.03
KRH29774	Soybean	cytosol	44.72	30.9
TraesCS1B01G037500.1	Wheat	cytosol	28.9	30.51
KRH24778	Soybean	nucleus	46.79	30.18
KRH29775	Soybean	nucleus	45.64	29.57
KRH24775	Soybean	cytosol	45.41	29.12
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	48.85	28.67
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	41.51	28.46
GSMUA_Achr6P34090_001	Banana	nucleus	39.91	28.43
GSMUA_Achr8P02550_001	Banana	nucleus	25.0	27.81
HORVU3Hr1G012550.6	Barley	cytosol	37.84	27.68
GSMUA_Achr10P...	Banana	cytosol	37.84	27.55
Solyc06g076280.1.1	Tomato	cytosol	47.25	27.54
KRH10241	Soybean	cytosol, nucleus, peroxisome	43.35	27.47
PGSC0003DMT400077972	Potato	cytosol	47.02	27.26
Bra033813.1-P	Field mustard	nucleus	36.24	27.15
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	39.45	26.71
KXG38103	Sorghum	cytosol	38.3	26.68
Zm00001d034664_P001	Maize	plastid	34.17	26.65
KXG21079	Sorghum	cytosol	37.61	26.32
TraesCS5B01G494500.1	Wheat	cytosol	39.45	26.18
KXG21080	Sorghum	cytosol	37.39	26.04
TraesCS5D01G494900.1	Wheat	cytosol	39.22	26.03
TraesCS5A01G481300.1	Wheat	cytosol	38.99	25.95
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	39.91	25.85
Bra030688.1-P	Field mustard	nucleus	44.04	25.84
Bra028390.1-P	Field mustard	cytosol	41.74	25.78
Zm00001d035671_P001	Maize	cytosol	36.7	25.56
Zm00001d011070_P001	Maize	cytosol	36.7	25.52
Bra026077.1-P	Field mustard	cytosol	17.2	25.51
Os03t0690600-03	Rice	cytosol	42.43	25.31
OQU92829	Sorghum	cytosol	42.43	25.2
GSMUA_Achr7P15080_001	Banana	cytosol	34.4	25.08
Zm00001d028603_P001	Maize	cytosol	41.97	24.93
KXG37250	Sorghum	cytosol	36.7	24.58
Bra015156.1-P	Field mustard	cytosol	17.89	24.53
Bra035653.1-P	Field mustard	cytosol	40.6	24.52
TraesCS3D01G067900.1	Wheat	nucleus	38.07	24.06
GSMUA_AchrUn_...	Banana	cytosol	35.55	23.52
TraesCS3A01G068000.1	Wheat	nucleus	37.84	23.04
TraesCS3B01G081100.1	Wheat	nucleus	37.61	22.94
TraesCS5D01G152700.1	Wheat	cytosol, plastid	40.6	22.87
TraesCS5B01G138100.1	Wheat	cytosol, plastid	40.6	22.81
TraesCS5A01G139000.1	Wheat	cytosol, plastid	40.6	22.81
HORVU5Hr1G045020.29	Barley	cytosol	41.05	22.74
KXG38064	Sorghum	nucleus	37.39	22.64
OQU91407	Sorghum	nucleus	35.55	22.59
TraesCS3D01G067700.1	Wheat	cytosol	37.39	22.58
EER91260	Sorghum	nucleus	37.16	22.47
TraesCS3B01G080900.1	Wheat	nucleus	36.93	22.33
Zm00001d047813_P002	Maize	nucleus	41.97	22.07
TraesCS3A01G067900.1	Wheat	cytosol	36.24	21.88
Zm00001d035670_P001	Maize	cytosol	36.24	21.76
EES18882	Sorghum	cytosol	36.47	21.69
TraesCS3D01G067800.1	Wheat	nucleus	33.49	21.6
Zm00001d033166_P001	Maize	nucleus	36.24	21.58
TraesCS1B01G037300.1	Wheat	cytosol	34.63	21.45
TraesCS3B01G081000.1	Wheat	cytosol	35.78	21.43
OQU91406	Sorghum	nucleus	36.01	20.99
TraesCS1D01G030800.1	Wheat	cytosol	33.72	20.97
TraesCS1A01G030300.1	Wheat	cytosol	33.95	20.96
Bra020715.1-P	Field mustard	cytosol, plastid	23.85	20.93
EES18880	Sorghum	cytosol	35.55	20.92
Bra017915.1-P	Field mustard	cytoskeleton, cytosol, nucleus, plastid	19.5	20.83
TraesCS1D01G030900.1	Wheat	cytosol	33.95	20.76
TraesCS1B01G037400.1	Wheat	cytosol	33.95	20.47
Bra036185.1-P	Field mustard	cytosol	22.94	20.2
Bra018860.1-P	Field mustard	nucleus	24.31	20.19
HORVU1Hr1G004440.1	Barley	cytosol	33.26	20.17
TraesCS1D01G031000.1	Wheat	cytosol	33.49	20.14
TraesCS1A01G030200.1	Wheat	cytosol	32.57	19.69
Bra021063.1-P	Field mustard	plastid	23.17	19.06
TraesCS1D01G031200.1	Wheat	cytosol	31.42	18.79
TraesCS1B01G037200.1	Wheat	nucleus	32.57	18.76
Bra028312.1-P	Field mustard	cytosol	19.5	18.72
Bra026237.1-P	Field mustard	plastid	22.48	18.32
Bra012280.1-P	Field mustard	cytosol	21.56	17.12
Bra022596.1-P	Field mustard	plastid	20.64	15.54

Protein Annotations

MapMan:15.5.12	EnsemblPlantsGene:Bra015584	EnsemblPlants:Bra015584.1	EnsemblPlants:Bra015584.1-P	GO:GO:0005575	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	InterPro:IPR005202	UniProt:M4DGG0	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF129	InterPro:TF_GRAS	TMHMM:TMhelix	UniParc:UPI0002544BCE	:

Description

AT1G07520 (E=5e-113) | scarecrow transcription factor family protein

Coordinates

chrA10:+:871524..873574

Molecular Weight (calculated)

50580.7 Da

IEP (calculated)

8.932

GRAVY (calculated)

-0.447

Length

436 amino acids

Sequence
(BLAST)

001: MWTLYVASKV EDIEEARSSK QSALTVVEDS KLTELFDKVL LLDCKSDLQV IEEGESVSSK PQVTKKEGGR TKKKSQTFDF RTLLTLCAQS ISARDKITAD
101: DLLRQIRKQC TPLGDASQRL AYFFANALQA RLEGSSGSTI TSYYDSIASK KRTAAQTLKS YHVFLYVSPF MTLMYFYSSK MILDAAKDAS QDRATEATDN
201: GVEIPQNGFY PMQRIEDMCR RLTEYCKQFG VPFEYNTIAS RNWETIRLEE FKIRPNKVLA VNTALRLKNV RDVTPGGEED CPRDRFLKLI RDMKPDVFLS
301: STVNGSFNAL FFTTRFKEAL FHYSLLLDMF GATLSKENPE RIHLEGEFYR REVMKMIACE RVDRVERPET YKQWQVRMMR DGFKQKPVEA ELVESIRVKM
401: KKWGYHKDFV LDEYSNWFLQ GWKGRILFSS SCWIFS

Best Arabidopsis Sequence Match ( AT1G07520.1 )
(BLAST)

001: MESNYSGVVN GYDVSFLPTS IPDLGFGVPS SSDFDLRMDQ YYHQPSIWVP DQDHHFSPPA DEIDSENTLL KYVNQLLMEE SLAEKQSIFY DSLALRQTEE
101: MLQQVISDSQ TQSSIPNNSI TTSSSSNSGD YSNSSNSSVR IENEVLFDNK HLGDSGVVSF PGSNMLRGGE QFGQPANEIL VRSMFSDAES VLQFKRGLEE
201: ASKFLPNTDQ WIFNLEPEME RVVPVKVEEG WSAISKTRKN HHEREEEEDD LEEARRRSKQ FAVNEEDGKL TEMFDKVLLL DGECDPQIIE DGENGSSKAL
301: VKKGRAKKKS RAVDFRTLLT LCAQSVSAGD KITADDLLRQ IRKQCSPVGD ASQRLAHFFA NALEARLEGS TGTMIQSYYD SISSKKRTAA QILKSYSVFL
401: SASPFMTLIY FFSNKMILDA AKDASVLHIV DFGILYGFQW PMFIQHLSKS NPGLRKLRIT GIEIPQHGLR PTERIQDTGR RLTEYCKRFG VPFEYNAIAS
501: KNWETIKMEE FKIRPNEVLA VNAVLRFKNL RDVIPGEEDC PRDGFLKLIR DMNPNVFLSS TVNGSFNAPF FTTRFKEALF HYSALFDLFG ATLSKENPER
601: IHFEGEFYGR EVMNVIACEG VDRVERPETY KQWQVRMIRA GFKQKPVEAE LVQLFREKMK KWGYHKDFVL DEDSNWFLQG WKGRILFSSS CWVPS

Arabidopsis Description

GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.