Factsheet for TraesCS5B01G494500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G494900.1	Wheat	cytosol	98.17	98.17
TraesCS5A01G481300.1	Wheat	cytosol	95.13	95.42
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	91.93	93.79
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	66.97	69.18
Zm00001d034664_P001	Maize	plastid	54.34	63.86
KXG37250	Sorghum	cytosol	61.49	62.06
Solyc04g011630.1.1	Tomato	cytosol	15.22	58.82
CDX68389	Canola	cytosol	7.46	57.65
VIT_06s0004g04990.t01	Wine grape	cytosol	34.09	50.68
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	23.74	49.21
CDX80265	Canola	endoplasmic reticulum, golgi	23.44	48.58
TraesCS1B01G037500.1	Wheat	cytosol	29.98	47.7
PGSC0003DMT400005480	Potato	cytosol	33.33	44.97
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	45.97	42.6
PGSC0003DMT400049420	Potato	cytosol	42.31	41.87
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	39.88	40.56
KRH29773	Soybean	cytosol	37.6	40.23
KRH24780	Soybean	cytosol	40.33	40.15
KRH10240	Soybean	cytosol	36.99	40.1
AT3G46600.1	Thale cress	cytosol	35.46	39.97
VIT_13s0019g01780.t01	Wine grape	nucleus	36.23	39.67
KRH65839	Soybean	cytosol, plastid	43.99	39.59
Bra015584.1-P	Field mustard	cytosol	26.18	39.45
KRH29771	Soybean	cytosol	40.79	39.41
VIT_06s0004g04980.t01	Wine grape	nucleus	42.16	39.35
Solyc01g100200.2.1	Tomato	nucleus	39.88	39.34
KRH24773	Soybean	nucleus	41.1	39.3
PGSC0003DMT400022997	Potato	cytosol, plastid	45.51	39.29
TraesCS4B01G141100.1	Wheat	cytosol	37.6	39.27
VIT_06s0004g04970.t01	Wine grape	cytosol	39.27	39.21
Bra033813.1-P	Field mustard	nucleus	34.7	39.18
VIT_13s0019g01810.t01	Wine grape	cytosol	44.6	39.17
TraesCS4B01G141200.1	Wheat	cytosol	33.79	39.15
Solyc06g082530.1.1	Tomato	cytosol	38.81	39.05
CDY71578	Canola	nucleus, plastid	30.9	38.96
Solyc09g010920.1.1	Tomato	cytosol	45.05	38.9
Solyc10g086530.1.1	Tomato	cytosol	44.9	38.76
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	39.42	38.48
CDY07777	Canola	cytosol, nucleus, peroxisome	39.42	38.48
CDY39530	Canola	cytosol	36.23	38.45
CDX79750	Canola	peroxisome	39.42	38.43
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	36.83	38.41
KRG99969	Soybean	cytosol	43.07	38.4
PGSC0003DMT400078286	Potato	nucleus	38.97	38.38
CDY47877	Canola	nucleus	36.07	38.35
Bra028391.1-P	Field mustard	nucleus	36.07	38.23
KRH49113	Soybean	cytosol	42.62	38.15
CDX82987	Canola	nucleus	34.86	38.1
TraesCS4B01G141400.1	Wheat	cytosol	38.2	37.97
PGSC0003DMT400016258	Potato	cytosol	42.01	37.91
KRH23095	Soybean	cytosol	37.9	37.9
AT5G59450.1	Thale cress	nucleus	35.16	37.87
KRH24775	Soybean	cytosol	39.12	37.79
CDX86475	Canola	nucleus	40.79	37.75
AT2G37650.1	Thale cress	cytosol	41.25	37.74
KRH29774	Soybean	cytosol	36.23	37.72
VIT_13s0019g01710.t01	Wine grape	cytosol	41.7	37.69
TraesCS4B01G336200.1	Wheat	cytosol	33.49	37.67
KRH23094	Soybean	cytosol	31.66	37.61
CDY33040	Canola	nucleus	34.09	37.52
TraesCS5B01G138100.1	Wheat	cytosol, plastid	44.14	37.37
VIT_13s0019g01700.t01	Wine grape	cytosol	43.07	37.24
TraesCS4B01G140800.1	Wheat	cytosol	33.49	37.23
KRH29775	Soybean	nucleus	38.05	37.15
VIT_06s0004g04950.t01	Wine grape	cytosol	42.62	37.14
Solyc06g076280.1.1	Tomato	cytosol	42.01	36.9
VIT_13s0019g01790.t01	Wine grape	cytosol	40.18	36.72
KRH29779	Soybean	cytosol	41.4	36.66
PGSC0003DMT400077972	Potato	cytosol	41.86	36.57
TraesCS4B01G141300.1	Wheat	cytosol	37.44	36.5
CDY06266	Canola	cytosol	35.01	36.39
Solyc05g053090.1.1	Tomato	cytosol	41.1	36.34
PGSC0003DMT400069949	Potato	cytosol	40.94	36.01
Bra030688.1-P	Field mustard	nucleus	40.49	35.8
TraesCS3B01G392600.1	Wheat	cytosol	44.29	35.71
TraesCS7B01G077800.1	Wheat	cytosol	39.73	35.51
KRH23090	Soybean	vacuole	33.49	35.43
KRH23089	Soybean	cytosol	34.7	35.4
CDY15616	Canola	nucleus	38.51	35.38
KRH10243	Soybean	nucleus	35.77	35.34
CDX77228	Canola	cytosol	36.07	35.27
TraesCS1B01G037300.1	Wheat	cytosol	37.75	35.23
KRH24778	Soybean	nucleus	36.23	35.21
Bra031581.1-P	Field mustard	cytosol	35.77	35.18
CDY47878	Canola	nucleus	36.99	35.17
AT2G29060.1	Thale cress	cytosol	36.99	35.01
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	39.57	34.99
TraesCS7B01G078300.1	Wheat	cytosol	39.12	34.82
CDX68388	Canola	cytosol	21.92	34.78
KRH10241	Soybean	cytosol, nucleus, peroxisome	36.23	34.59
AT1G07520.3	Thale cress	cytosol	36.53	34.48
Bra028390.1-P	Field mustard	cytosol	36.99	34.42
Bra035653.1-P	Field mustard	cytosol	37.44	34.07
CDY31749	Canola	cytosol	37.6	34.02
CDY06265	Canola	cytosol	35.62	33.91
AT1G07530.1	Thale cress	cytosol	39.57	33.81
Bra031580.1-P	Field mustard	cytosol	35.46	33.77
TraesCS1B01G037400.1	Wheat	cytosol	36.99	33.61
CDY09912	Canola	cytosol	35.62	33.43
VIT_06s0004g04960.t01	Wine grape	nucleus	40.33	33.25
TraesCS4B01G141500.1	Wheat	peroxisome	40.49	32.96
TraesCS3B01G080900.1	Wheat	nucleus	35.77	32.59
TraesCS3B01G081000.1	Wheat	cytosol	35.77	32.28
TraesCS3B01G081100.1	Wheat	nucleus	35.01	32.17
CDY09911	Canola	nucleus	28.31	31.85
TraesCS1B01G037200.1	Wheat	nucleus	35.62	30.91
TraesCS2B01G217500.1	Wheat	cytosol	20.4	24.19
TraesCS4B01G266700.1	Wheat	cytosol	18.87	23.09
TraesCS2B01G239400.1	Wheat	cytosol	18.26	21.05
TraesCS3B01G441600.1	Wheat	cytosol	17.5	20.83
TraesCS2B01G413500.1	Wheat	cytosol	17.35	18.07

Protein Annotations

EnsemblPlants:TraesCS5B01G494500.1	EnsemblPlantsGene:TraesCS5B01G494500	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF23
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr5B:+:662454135..662456108

Molecular Weight (calculated)

73521.0 Da

IEP (calculated)

6.818

GRAVY (calculated)

-0.436

Length

657 amino acids

Sequence
(BLAST)

001: MGSCEDVEYG DVFSVPNPAA APAYALDFSL HHHYHHQQQQ QLRFPPSSYG FHGLPAGPAA HYQPSPPQSA LIGSTPSPVS TTTDLGSPEE ASDDAVLAYI
101: NQFLLEDDDD DESSAPGAAA APARDSALLA VAKPFVDIIA DAKPAYQHSS WTDPCCAFAG MGGGSPDMFV SSRQSSCQLV PCDSVKVEEE CAVHKGRKNR
201: HGDDDLEPED ERRRKQLALS EEETVREMFD KVLLCNGVNC ILQSPLPAEA EISSVYVKGS GNRRGRKKGK TGVPTVEEES VDLTTLLIHC AQAAAIDDHR
301: GSGELLKQIR RHSSPHGDAG QRLAHYIANG LEARLAGTGS TVYRSLVARR TSSADMLKIF KLYGTACPFI RMSRFYSNEA ILDAAAKGVT SVHIVDYGID
401: WGFQWPIFLQ RISKRDGGPP RIRITAIDLP QPGFRPAERL EATGRRLSEY AKMFHVPFEY RAIAAKWDAI RVEDLRIDKD DLLIVNCLFR MRHMMDETVT
501: DESPRKTVLN TIRKMNPHRF IHAVVNGTYN APFFVTRFKE ALFYFSSLYD MLEATAPPAD EHRQLIEREY FGREVLNVVA CEGTERVERP ETYKQWQVRN
601: LRAGFRQVPL LQESVKKARY KVIKSYHRDF FVDEDNKWML QGWKGRVIGA LSTWKPS

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.