Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136000.1 | Wheat | cytosol | 96.18 | 93.22 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 96.03 | 93.07 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 91.89 | 88.51 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 52.46 | 49.92 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 53.26 | 49.7 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 44.67 | 49.56 |
| OQU84116 | Sorghum | nucleus | 46.74 | 47.5 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 55.48 | 47.48 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 43.72 | 47.09 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 55.17 | 47.02 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 33.07 | 46.33 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 30.37 | 46.25 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 42.45 | 45.18 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 54.85 | 42.75 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 39.27 | 37.6 |
| Os11t0139600-01 | Rice | nucleus | 32.91 | 35.51 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 41.49 | 33.63 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 36.41 | 32.53 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 41.97 | 32.39 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 35.61 | 30.98 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 34.18 | 28.4 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 32.11 | 28.25 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 32.59 | 28.16 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 32.27 | 28.16 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 20.03 | 22.74 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 19.87 | 22.64 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 19.24 | 22.53 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 18.92 | 20.88 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 18.44 | 18.38 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G141100.1 | EnsemblPlantsGene:TraesCS4B01G141100 | InterPro:IPR005202 | InterPro:TF_GRAS | ncoils:Coil | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF124 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : |
Description
No Description!
Coordinates
chr4B:-:185867678..185869567
Molecular Weight (calculated)
70642.4 Da
IEP (calculated)
5.604
GRAVY (calculated)
-0.377
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPPPQSPSV YLDIPPSPYG GTVGDLVLPY ITRILMEEDI DDRFFYQYPD HLAFLQAQQQ FTQILDDAKN LLSGEGGDME KMHSDESLQG IRGGSMCLAD
101: KDVPSWTFSD GAEVDNNGDQ SKLNPSNRDM LNFAFLKGME EANKFLPRDN QPQADVFSIN QAKEIFGGRK ARRDADKPEE VVGRASKLLM PELEEDGARE
201: MINKIMLNSY ELCGETMEEL QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS ATGDAAQRLA HCFAKGLEAR
301: LAGTGSQVYK SLMAKHTSTM EFLKGYELFM AACSFKRVAF TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR DGGPLEVRIT GIDLPQPGFR
401: PAKRLEETGR ALSNCARQFG LPFKFRGIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM DESLVIDRPS PRDVVLSNIR EMQPVVFIQG VVNGSSGPFF
501: LARFREALFF YSSVFDMLDA TTPPDSYQRF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAG LRQLPLKPII TKVATGKVKS LYHKEFVVDV
601: DQGWLLQGWK GRILYAHSAW VADDTSSEY
101: KDVPSWTFSD GAEVDNNGDQ SKLNPSNRDM LNFAFLKGME EANKFLPRDN QPQADVFSIN QAKEIFGGRK ARRDADKPEE VVGRASKLLM PELEEDGARE
201: MINKIMLNSY ELCGETMEEL QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS ATGDAAQRLA HCFAKGLEAR
301: LAGTGSQVYK SLMAKHTSTM EFLKGYELFM AACSFKRVAF TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR DGGPLEVRIT GIDLPQPGFR
401: PAKRLEETGR ALSNCARQFG LPFKFRGIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM DESLVIDRPS PRDVVLSNIR EMQPVVFIQG VVNGSSGPFF
501: LARFREALFF YSSVFDMLDA TTPPDSYQRF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAG LRQLPLKPII TKVATGKVKS LYHKEFVVDV
601: DQGWLLQGWK GRILYAHSAW VADDTSSEY
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.