Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136000.1 | Wheat | cytosol | 97.53 | 97.53 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 93.07 | 96.03 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 91.68 | 91.12 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 44.53 | 58.03 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 35.75 | 57.28 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 50.69 | 48.74 |
| OQU84116 | Sorghum | nucleus | 45.15 | 47.33 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 54.55 | 47.33 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 32.05 | 46.33 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 35.44 | 46.18 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 45.45 | 45.88 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 42.53 | 45.7 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 45.15 | 45.57 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 45.92 | 44.68 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 53.31 | 43.14 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 49.15 | 42.88 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 37.44 | 37.1 |
| Os11t0139600-01 | Rice | nucleus | 32.05 | 35.68 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 40.99 | 33.67 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 39.75 | 33.25 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 34.21 | 30.79 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 32.82 | 30.17 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 32.05 | 29.05 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 32.05 | 28.81 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 18.18 | 27.7 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 19.11 | 24.75 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 20.18 | 23.65 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 19.41 | 22.83 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 17.1 | 22.7 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 18.49 | 21.05 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 17.26 | 17.75 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G176600.1 | EnsemblPlantsGene:TraesCS4A01G176600 | InterPro:IPR005202 | InterPro:TF_GRAS | ncoils:Coil | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF124 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : |
Description
No Description!
Coordinates
chr4A:+:448103319..448105268
Molecular Weight (calculated)
72711.8 Da
IEP (calculated)
5.200
GRAVY (calculated)
-0.358
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIAPEELLG LKEHMEPPPP SPSVYLDIPP SPYGGSVGDL VLPYITRMLM EEDIDDRFFY QYPDHLAFLQ AQQQFTQILD DAKNLLSGEG GDMEKMHSDA
101: SLQGIRGGSM CLADKDVPSW TFSDGAEVYN NGDQSKLNRS NEAMLNFAFL KGMEEANKFL PRDNQPQADV FSVDQAKEIF GRSISGGGRK GQRDVDKLEE
201: VVGRASKLLM PELEEDGASE MINKIMLNSY ELCGETMEEL QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS
301: ATGDAAQRLA YCFAKGLEAR LAGTGSQVYK SLMAKHTSTM EFLKGYELFM AACSFKRVAF TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR
401: DGGPPEVRIT GIDLPQPGFR PAKRLEETGR ALSNCARQFG LPFKFHAIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM DESLVIDRPS PRDVVLSNIR
501: EMQPDVFVQG VVNGSSGPFF LARFREALFF YSSVFDMLDT TTPPESYERF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAS LRQLPLKPII
601: TKVATGKVKS LYHKEFVVDV DQGWLLQGWK GRILYAHSAW VADDTSSEY
101: SLQGIRGGSM CLADKDVPSW TFSDGAEVYN NGDQSKLNRS NEAMLNFAFL KGMEEANKFL PRDNQPQADV FSVDQAKEIF GRSISGGGRK GQRDVDKLEE
201: VVGRASKLLM PELEEDGASE MINKIMLNSY ELCGETMEEL QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS
301: ATGDAAQRLA YCFAKGLEAR LAGTGSQVYK SLMAKHTSTM EFLKGYELFM AACSFKRVAF TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR
401: DGGPPEVRIT GIDLPQPGFR PAKRLEETGR ALSNCARQFG LPFKFHAIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM DESLVIDRPS PRDVVLSNIR
501: EMQPDVFVQG VVNGSSGPFF LARFREALFF YSSVFDMLDT TTPPESYERF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAS LRQLPLKPII
601: TKVATGKVKS LYHKEFVVDV DQGWLLQGWK GRILYAHSAW VADDTSSEY
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.