Factsheet for TraesCS2A01G395400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G393200.1	Wheat	cytosol	96.36	96.97
TraesCS2B01G413500.1	Wheat	cytosol	96.51	96.51
HORVU2Hr1G094040.2	Barley	cytosol, plastid	45.96	75.32
Os04t0580300-01	Rice	cytosol, nucleus, plastid	73.06	74.47
Zm00001d002573_P001	Maize	cytosol	69.41	70.31
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	69.1	69.98
EES12703	Sorghum	cytosol, nucleus, plastid	69.1	66.87
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	45.8	49.49
GSMUA_AchrUn_...	Banana	plastid	45.01	48.55
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	41.84	46.98
GSMUA_Achr1P03650_001	Banana	mitochondrion	40.57	44.91
GSMUA_Achr4P24960_001	Banana	cytosol	34.23	44.54
GSMUA_Achr9P18770_001	Banana	cytosol	39.46	43.76
CDY27821	Canola	cytosol	29.79	42.34
CDY00533	Canola	cytosol	29.64	41.93
Bra028312.1-P	Field mustard	cytosol	29.79	41.41
VIT_16s0050g00950.t01	Wine grape	cytosol, nucleus, plastid	35.18	37.69
CDY27063	Canola	cytosol, plastid	33.91	37.15
Bra022596.1-P	Field mustard	plastid	33.91	36.96
Solyc06g036170.1.1	Tomato	nucleus	35.02	36.96
CDX91655	Canola	cytosol	34.23	36.73
PGSC0003DMT400076932	Potato	nucleus	35.02	36.47
Solyc03g025170.1.1	Tomato	nucleus	35.02	35.02
AT5G52510.1	Thale cress	nucleus	35.18	34.69
PGSC0003DMT400026240	Potato	nucleus, plastid	35.18	33.95
KRG91573	Soybean	plastid	31.85	33.84
KRH35251	Soybean	plastid	31.54	33.73
KRH38397	Soybean	plastid	27.58	32.22
KRH08880	Soybean	plastid	32.81	31.51
TraesCS5A01G414000.1	Wheat	cytosol	20.6	30.52
TraesCS3A01G408000.1	Wheat	cytosol	26.47	30.25
TraesCS5A01G409800.1	Wheat	nucleus, plastid	22.35	28.14
TraesCS2A01G189600.1	Wheat	cytosol	24.25	27.62
TraesCS4A01G039000.1	Wheat	nucleus	21.39	27.61
TraesCS2A01G214400.1	Wheat	cytosol	22.03	24.39
TraesCS5A01G505900.1	Wheat	cytosol	15.37	23.95
TraesCS4A01G176400.1	Wheat	cytosol	16.8	21.29
TraesCS4A01G176300.1	Wheat	cytosol	19.02	17.78
TraesCS5A01G506000.1	Wheat	cytosol	16.96	17.72
TraesCS4A01G176700.1	Wheat	cytosol	18.7	17.69
TraesCS5A01G506100.1	Wheat	cytosol	17.91	17.57
TraesCS4A01G177100.1	Wheat	nucleus	17.75	17.42
TraesCS4A01G176600.1	Wheat	cytosol	17.75	17.26
TraesCS5A01G481300.1	Wheat	cytosol	17.12	16.49
TraesCS4A01G176500.1	Wheat	cytosol	13.0	16.47
TraesCS7A01G173000.1	Wheat	cytosol	19.18	16.18
TraesCS1A01G030300.1	Wheat	cytosol	17.27	15.44
TraesCS5A01G139000.1	Wheat	cytosol, plastid	18.7	15.21
TraesCS1A01G030200.1	Wheat	cytosol	17.12	14.98
TraesCS5A01G080300.1	Wheat	cytosol	17.59	14.92
TraesCS4A01G176200.1	Wheat	peroxisome	18.38	14.46
TraesCS3A01G068000.1	Wheat	nucleus	16.32	14.39
TraesCS3A01G067900.1	Wheat	cytosol	16.01	13.99
TraesCS3A01G360300.1	Wheat	cytosol, extracellular, nucleus	16.64	13.29

Protein Annotations

EnsemblPlants:TraesCS2A01G395400.1	EnsemblPlantsGene:TraesCS2A01G395400	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF127	PFAM:PF03514
PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr2A:+:647345252..647347147

Molecular Weight (calculated)

66340.5 Da

IEP (calculated)

7.027

GRAVY (calculated)

-0.128

Length

631 amino acids

Sequence
(BLAST)

001: MEPGGPWRDP RQGYMYGLGS PMQMPAQQRS DPAAAGGVLK RSLGELERWQ HQRQFAMQQE LYMRAVRQRT AATSPAVSPL TSADIAAVLG GVPAQPFFSG
101: SSLGGGLASP SSTLSSLTTA SRAAMPLIQQ HVQRQAPFLP SSAHAQAQAQ AHALAVARVP APSAAGSELS ILQDLEKQLL GDDDEAEPAM SGTGSTVTSS
201: EWEETIQRLN SITAVPSPPL YAEATPNNKN NYSAAMTGSP SNSSTSTASS SASCSPPISA TTSRQLLSEA AAAIADGNLK TAAANLATLK RAANPRVDAE
301: QRLVAVMVAA LSSRIAPTAS ASSQHLADLC GAEHHTGSQI LHDITPCFRL ALDAANIAIV EAVAGHRVIH LVDFDINAPQ HAALIQRLAD RRVPGTCLQV
401: TAVTDPTSPF TQSLAATLPG VGERLKKLAE RAGIEYHFRM ISCRAAEIEA SKLGCEPGEA LAVNLAFALS HVPDESVSPA NPRDELLRRV RALGPQVVAL
501: VEQELNSNTA PLATRFSDAY LHYGAILDAL DSTVSRDSAD RARAEEAVAN MSASAVGREG ADRLERCEVF GKWRARFGMA GFRPVALAAG IADQVMARAG
601: APPPGLVVNQ ENGVLRLGWK QRVVTVASAW R

Best Arabidopsis Sequence Match ( AT5G52510.1 )
(BLAST)

001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR

Arabidopsis Description

SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.