Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G135500.1 | Wheat | cytosol | 95.49 | 95.05 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 59.41 | 63.24 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 61.74 | 61.74 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 62.05 | 59.82 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 32.97 | 52.35 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 39.35 | 50.8 |
| OQU84120 | Sorghum | nucleus | 50.08 | 50.79 |
| KXG29232 | Sorghum | cytosol | 50.39 | 47.65 |
| Zm00001d048600_P001 | Maize | nucleus | 47.74 | 47.6 |
| Zm00001d003553_P001 | Maize | cytosol | 44.17 | 46.79 |
| KXG26392 | Sorghum | cytosol | 46.03 | 46.69 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 45.57 | 45.15 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 34.53 | 44.58 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 45.88 | 43.7 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 30.17 | 43.21 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 47.9 | 41.18 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 47.59 | 38.15 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 43.86 | 37.9 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 34.68 | 34.05 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 39.5 | 32.73 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 39.66 | 32.28 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 19.6 | 29.58 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 32.35 | 29.05 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 32.35 | 28.81 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 30.33 | 27.62 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 30.64 | 27.32 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 20.53 | 26.35 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 21.15 | 24.55 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 17.57 | 23.11 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 18.66 | 21.74 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 18.97 | 21.4 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 17.42 | 17.75 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G177100.1 | EnsemblPlantsGene:TraesCS4A01G177100 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4A:+:448527349..448529280
Molecular Weight (calculated)
71880.2 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.331
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAQEEPLG LVKPAPPPPP PSFFLDQPSI TNGGSQSQQP QDDLALAYIS RMLMEEDITD KFFYQHPEHP TLLQAEQPFA EILSASGIAT AGAHGSSALL
101: PSQGNNTGIM ASAFLSSEVH SPPLFLNGTV TAEAPRSGVT MGDLSSMAFF KGMEEANSFL PTVNVMVDAR GRKKRSGMDS ETEACMGRSS KQIAVRVLAH
201: NDSEEEETAL ELDLLILNGY DMYSNETMKE RGGQAAHQSI CRKAPCVRHS ARQMVVADLE TLLIRCAEAV ATNDRSNAGD LLKKIKQHSL PTGDARQRLA
301: YYFAEGLEAR LAGTGRQIYH SITAANHTST VELFKSYHLC IAACCFLKVS LNFSNKNIYN AVAGRKKLHI VHYGVNDGFQ WPDLLRWLAD REGGPPEVRI
401: TGIISPQPGP CPVKQAKETK RRLSYCARQF GVPFKFHAII AKLETVHAED LDIDPDEVLV VNNMFHFRTL MDESLTFDME NPRDLVLNTI RKMKPSMLIH
501: AAVNGAYSSA FFMTRFRQAL NNFTAQFDMM ESTMMQNKDK MLLVERHIFA RSVMNIIACE GPDRVERPQN YKEWHARNQR AGLRQLSLDP DIVKMLKDQV
601: KKQYHKHFMI DEDQRWLLLG WKGRVLYALS TWVADDASGS QLE
101: PSQGNNTGIM ASAFLSSEVH SPPLFLNGTV TAEAPRSGVT MGDLSSMAFF KGMEEANSFL PTVNVMVDAR GRKKRSGMDS ETEACMGRSS KQIAVRVLAH
201: NDSEEEETAL ELDLLILNGY DMYSNETMKE RGGQAAHQSI CRKAPCVRHS ARQMVVADLE TLLIRCAEAV ATNDRSNAGD LLKKIKQHSL PTGDARQRLA
301: YYFAEGLEAR LAGTGRQIYH SITAANHTST VELFKSYHLC IAACCFLKVS LNFSNKNIYN AVAGRKKLHI VHYGVNDGFQ WPDLLRWLAD REGGPPEVRI
401: TGIISPQPGP CPVKQAKETK RRLSYCARQF GVPFKFHAII AKLETVHAED LDIDPDEVLV VNNMFHFRTL MDESLTFDME NPRDLVLNTI RKMKPSMLIH
501: AAVNGAYSSA FFMTRFRQAL NNFTAQFDMM ESTMMQNKDK MLLVERHIFA RSVMNIIACE GPDRVERPQN YKEWHARNQR AGLRQLSLDP DIVKMLKDQV
601: KKQYHKHFMI DEDQRWLLLG WKGRVLYALS TWVADDASGS QLE
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.