CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048600_P001	Maize	nucleus	68.09	71.78
TraesCS4B01G140800.1	Wheat	cytosol	45.74	52.62
TraesCS4B01G336200.1	Wheat	cytosol	44.41	51.71
TraesCS4D01G135900.1	Wheat	cytosol	48.38	51.57
TraesCS5A01G506000.1	Wheat	cytosol	45.59	51.32
TraesCS4D01G135500.1	Wheat	cytosol	48.68	51.24
OQU84120	Sorghum	nucleus	47.06	50.47
TraesCS4A01G177100.1	Wheat	nucleus	47.65	50.39
TraesCS5A01G506100.1	Wheat	cytosol	47.5	50.23
KXG26392	Sorghum	cytosol	46.03	49.37
TraesCS4A01G176700.1	Wheat	cytosol	48.38	49.33
TraesCS4D01G332000.1	Wheat	cytosol	48.68	49.04
OQU84113	Sorghum	cytosol, nucleus, plastid	43.97	46.79
HORVU4Hr1G027480.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	47.94	46.11
OQU84115	Sorghum	cytosol	32.65	45.59
KXG29219	Sorghum	cytosol	43.24	42.67
OQU84114	Sorghum	mitochondrion	29.85	42.38
OQU84111	Sorghum	cytosol	41.62	41.99
GSMUA_Achr5P08320_001	Banana	cytosol	27.65	41.87
EES09053	Sorghum	cytosol	38.97	41.41
OQU84105	Sorghum	cytosol	44.12	41.1
EES16206	Sorghum	cytosol	44.12	41.1
KXG29228	Sorghum	cytosol	37.06	40.71
OQU84116	Sorghum	nucleus	37.06	40.71
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	37.65	40.31
OQU83981	Sorghum	cytosol	29.41	40.24
OQU83980	Sorghum	cytosol	36.62	40.1
OQU84112	Sorghum	cytosol	41.62	39.47
KXG29224	Sorghum	nucleus	40.15	39.39
OQU83979	Sorghum	plastid	34.56	38.72
KXG29223	Sorghum	cytosol	40.15	38.4
OQU90003	Sorghum	cytosol	42.94	37.82
OQU83978	Sorghum	mitochondrion	35.0	37.6
KXG36217	Sorghum	cytosol	44.71	36.63
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	42.06	35.53
OQU92829	Sorghum	cytosol	37.5	34.74
OQU81651	Sorghum	cytosol	35.74	34.71
KXG38103	Sorghum	cytosol	31.32	34.03
KXG21079	Sorghum	cytosol	30.88	33.71
KXG21080	Sorghum	cytosol	30.88	33.55
KXG37250	Sorghum	cytosol	31.76	33.18
EES01740	Sorghum	cytosol	36.76	30.98
OQU91407	Sorghum	nucleus	29.85	29.59
EER91260	Sorghum	nucleus	30.29	28.57
KXG38064	Sorghum	nucleus	30.0	28.33
OQU91406	Sorghum	nucleus	30.74	27.94
EES18880	Sorghum	cytosol	30.0	27.53
EES18882	Sorghum	cytosol	29.41	27.29
EER97449	Sorghum	cytosol	19.71	24.5
EER95348	Sorghum	cytosol	19.12	24.25
EER97346	Sorghum	cytosol	19.41	23.16
KXG33821	Sorghum	cytosol	18.53	22.14
EES18257	Sorghum	cytosol	18.24	22.02
EES05727	Sorghum	cytosol	16.76	18.12
EES12703	Sorghum	cytosol, nucleus, plastid	15.0	15.64

Protein Annotations

EnsemblPlants:KXG29232	EnsemblPlantsGene:SORBI_3005G231000	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF27	PFAM:PF03514	PFscan:PS50985	ProteinID:KXG29232	ProteinID:KXG29232.1	UniParc:UPI0003C72D04
UniProt:A0A1B6PU86	MapMan:15.5.12	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71729295..71731817

Molecular Weight (calculated)

75929.9 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.355

Length

680 amino acids

Sequence
(BLAST)

001: MGIPPELEFS EKRPQVVDFT EPVPPSPSTY LLDLLQAPQV DNGKDDQSYI SHMLLEEDTI GNLLYQYPNH PAALLTGTAE QPFAQILSAA DATSDALTIW
101: PCNSIKNTSL QLSVATPDEY YSYCDMTTSE KLPGDMDSMH VRQDASSLLM NSMHEALAME PNRLLSAAKS SSCCMDVISM AFFKGMEEAN KLLPLQDSET
201: TLARGRGWKK RLQAGKGDDA NVVAMCRSSK QKVAQMTQPD SEEEAAAREM LDRLMLNDNA SHAADVQQEL IIGSMELEKP RGRRHGASAS HTAVDLHALL
301: IRCAEAVATN DRQGVADLLL RIRHHSSPTG DGTQRLAHCF AQGLEARLMG TGSQMYHSLV AKSASATVIL KVYRLYMAAC SILPLRFPLT NKTTYEAVAG
401: RKKLHVVHYG LGPGFQWPDL LRMLSHREGG PPEVRLTGID NPLPGFHPGQ IIEETGRRLS DCARQFRVPF KFRAIAAKSD DVRAEDLDID PEEVLVVISH
501: FHFRTLMDES VIIDRPNPRD TVLKNIKKMR PKVFIHGILN GSYSGAFFVS RFREALNNFA ALFDLMDTTV PQENQNRLLV EQELARCAMN IIACEGVDRV
601: ERPHSYKQWH VRCERAGLRQ LPLDPDIVRA SKDKVNKECR KYIVINEDHG WLLKGWKGRV LAAISTWMAE DDRSDLGNDQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.