Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09053 | Sorghum | cytosol | 55.59 | 59.84 |
| OQU84111 | Sorghum | cytosol | 56.17 | 57.42 |
| OQU84105 | Sorghum | cytosol | 59.65 | 56.3 |
| OQU84112 | Sorghum | cytosol | 56.6 | 54.39 |
| OQU90003 | Sorghum | cytosol | 60.09 | 53.63 |
| KXG36217 | Sorghum | cytosol | 61.25 | 50.84 |
| KXG29223 | Sorghum | cytosol | 52.25 | 50.63 |
| KXG29224 | Sorghum | nucleus | 50.65 | 50.36 |
| OQU84106 | Sorghum | cytosol, endoplasmic reticulum, plastid | 58.49 | 50.06 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 46.15 | 49.77 |
| EES16206 | Sorghum | cytosol | 52.69 | 49.73 |
| OQU84115 | Sorghum | cytosol | 35.12 | 49.69 |
| OQU84116 | Sorghum | nucleus | 42.96 | 47.82 |
| OQU84114 | Sorghum | mitochondrion | 33.09 | 47.6 |
| KXG29228 | Sorghum | cytosol | 42.24 | 47.01 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 30.48 | 46.77 |
| OQU83981 | Sorghum | cytosol | 33.67 | 46.68 |
| OQU84120 | Sorghum | nucleus | 42.67 | 46.37 |
| KXG26392 | Sorghum | cytosol | 42.09 | 45.74 |
| OQU84119 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 40.78 | 44.25 |
| OQU83980 | Sorghum | cytosol | 39.62 | 43.96 |
| KXG29232 | Sorghum | cytosol | 42.67 | 43.24 |
| OQU83979 | Sorghum | plastid | 37.59 | 42.67 |
| OQU83978 | Sorghum | mitochondrion | 37.88 | 41.23 |
| OQU81651 | Sorghum | cytosol | 41.07 | 40.43 |
| OQU92829 | Sorghum | cytosol | 41.22 | 38.69 |
| KXG38103 | Sorghum | cytosol | 34.98 | 38.5 |
| KXG21079 | Sorghum | cytosol | 33.96 | 37.56 |
| KXG37250 | Sorghum | cytosol | 34.98 | 37.02 |
| KXG21080 | Sorghum | cytosol | 33.53 | 36.9 |
| EES01740 | Sorghum | cytosol | 40.78 | 34.82 |
| OQU91407 | Sorghum | nucleus | 32.22 | 32.36 |
| EER91260 | Sorghum | nucleus | 33.09 | 31.62 |
| KXG38064 | Sorghum | nucleus | 32.95 | 31.53 |
| EES18882 | Sorghum | cytosol | 32.51 | 30.56 |
| OQU91406 | Sorghum | nucleus | 32.8 | 30.21 |
| EES18880 | Sorghum | cytosol | 31.93 | 29.69 |
| EER97449 | Sorghum | cytosol | 20.17 | 25.41 |
| EER95348 | Sorghum | cytosol | 18.87 | 24.25 |
| EES18257 | Sorghum | cytosol | 19.59 | 23.98 |
| EER97346 | Sorghum | cytosol | 19.59 | 23.68 |
| KXG33821 | Sorghum | cytosol | 18.87 | 22.85 |
| EES05727 | Sorghum | cytosol | 17.27 | 18.92 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 15.53 | 16.41 |
Protein Annotations
| EnsemblPlants:KXG29219 | EnsemblPlantsGene:SORBI_3005G229500 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:KXG29219 | ProteinID:KXG29219.1 | SEG:seg |
| UniParc:UPI0003C6C1B2 | UniProt:A0A1B6PU71 | MapMan:15.5.12 | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:71657939..71661103
Molecular Weight (calculated)
76900.5 Da
IEP (calculated)
5.278
GRAVY (calculated)
-0.339
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPEGEGL FVDPEPFSPS IFLDLSPTPR PDGNGEAPAS SDDLVLPFIS RILMEEDIDD QFFYQFPDHP VLLQAQEPYA QILSDAAAAR TNSAASGSGS
101: PATVSPSSSS DPAQLLLSPP YPDAGLHDFT NDHVGTFFLP AQGGGSPEFE QSPAQLRTTT LPAGDGDHAA LASVFFKRED ADAEMLNKAF LKGMEEAKKF
201: LPTTNSLLID RGAEEVEEGI NGRCRKDRDR LSWDDLEAET CRKSKLMVPE PEETGEMVDE MIVNGLKLCL KEMEALRITM GSEAKKKARK GKGKSAQGRS
301: SSNEAVELST LLIHCAQAVA TDNRRSATEL LRQIKQHSSP KGDATQRLAH CFAEGLEARL AGSGSQLYRS LMAERVSVVE YLKAYWLYLA ACCFKMTAFR
401: FSNMTILKAI AGRKKVHIVN YGMDYGVQWP SLLYHMANLE GGPPEVRITG IDLPQPGFRP AMRIEETGHR LSNYARQLGV PFKFHGITAK WDTVRVDDLN
501: IDPDEVLIVN SIIQFGNLMD EGVNIDSPSP RDVVLRTIRK MQPDAFILYV MNVSYSAPFF VTRFREALFF YSAMFDMLDA TAPRDSHQRF LVEQHLFRQC
601: ALSVVACEGM DRVERAETYK QWQVRNHRAG LRQLPLDPDL VKTLRDKVRD QYHKDFVIDT DHNWLLEGWK GRILYAMSTW VADNPVSEL
101: PATVSPSSSS DPAQLLLSPP YPDAGLHDFT NDHVGTFFLP AQGGGSPEFE QSPAQLRTTT LPAGDGDHAA LASVFFKRED ADAEMLNKAF LKGMEEAKKF
201: LPTTNSLLID RGAEEVEEGI NGRCRKDRDR LSWDDLEAET CRKSKLMVPE PEETGEMVDE MIVNGLKLCL KEMEALRITM GSEAKKKARK GKGKSAQGRS
301: SSNEAVELST LLIHCAQAVA TDNRRSATEL LRQIKQHSSP KGDATQRLAH CFAEGLEARL AGSGSQLYRS LMAERVSVVE YLKAYWLYLA ACCFKMTAFR
401: FSNMTILKAI AGRKKVHIVN YGMDYGVQWP SLLYHMANLE GGPPEVRITG IDLPQPGFRP AMRIEETGHR LSNYARQLGV PFKFHGITAK WDTVRVDDLN
501: IDPDEVLIVN SIIQFGNLMD EGVNIDSPSP RDVVLRTIRK MQPDAFILYV MNVSYSAPFF VTRFREALFF YSAMFDMLDA TAPRDSHQRF LVEQHLFRQC
601: ALSVVACEGM DRVERAETYK QWQVRNHRAG LRQLPLDPDL VKTLRDKVRD QYHKDFVIDT DHNWLLEGWK GRILYAMSTW VADNPVSEL
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.