Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0545800-01 | Rice | cytosol, nucleus | 89.12 | 88.97 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 87.89 | 87.89 |
| HORVU2Hr1G043780.1 | Barley | cytosol | 87.54 | 87.54 |
| GSMUA_Achr8P03610_001 | Banana | cytosol | 22.11 | 87.5 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 87.37 | 87.37 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 87.37 | 87.37 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 94.04 | 86.87 |
| GSMUA_Achr6P24310_001 | Banana | cytosol | 65.61 | 69.91 |
| Solyc06g035620.2.1 | Tomato | cytosol | 37.72 | 65.95 |
| VIT_19s0014g04940.t01 | Wine grape | cytosol | 60.7 | 59.35 |
| KRH55599 | Soybean | plastid | 58.42 | 58.63 |
| KRH22210 | Soybean | cytosol, plastid | 58.42 | 57.71 |
| KRH25905 | Soybean | cytosol, plastid | 57.37 | 57.57 |
| KRH27129 | Soybean | plastid | 56.49 | 57.4 |
| Solyc12g005340.1.1 | Tomato | cytosol | 54.74 | 55.91 |
| GSMUA_Achr9P12070_001 | Banana | mitochondrion, plastid | 50.7 | 55.58 |
| PGSC0003DMT400056120 | Potato | cytosol | 54.21 | 55.28 |
| Solyc07g063940.1.1 | Tomato | cytosol, nucleus, peroxisome | 55.96 | 54.72 |
| PGSC0003DMT400049492 | Potato | cytosol | 55.61 | 54.47 |
| GSMUA_Achr9P24710_001 | Banana | endoplasmic reticulum, plastid | 48.42 | 47.34 |
| EER97449 | Sorghum | cytosol | 43.16 | 44.97 |
| EER95348 | Sorghum | cytosol | 42.11 | 44.78 |
| EES18257 | Sorghum | cytosol | 38.25 | 38.72 |
| KXG33821 | Sorghum | cytosol | 37.89 | 37.96 |
| OQU83981 | Sorghum | cytosol | 20.35 | 23.34 |
| EES05727 | Sorghum | cytosol | 24.21 | 21.94 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 25.09 | 21.93 |
| OQU84115 | Sorghum | cytosol | 18.6 | 21.77 |
| KXG21079 | Sorghum | cytosol | 23.51 | 21.51 |
| OQU84116 | Sorghum | nucleus | 23.16 | 21.32 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 23.16 | 20.66 |
| KXG21080 | Sorghum | cytosol | 22.63 | 20.61 |
| OQU84120 | Sorghum | nucleus | 22.81 | 20.5 |
| KXG38103 | Sorghum | cytosol | 22.46 | 20.45 |
| KXG37250 | Sorghum | cytosol | 22.46 | 19.66 |
| KXG29219 | Sorghum | cytosol | 23.68 | 19.59 |
| KXG29232 | Sorghum | cytosol | 23.16 | 19.41 |
| KXG26392 | Sorghum | cytosol | 21.58 | 19.4 |
| OQU84111 | Sorghum | cytosol | 22.63 | 19.14 |
| OQU83980 | Sorghum | cytosol | 20.7 | 19.0 |
| OQU83979 | Sorghum | plastid | 20.18 | 18.95 |
| KXG29228 | Sorghum | cytosol | 20.53 | 18.9 |
| OQU84119 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 21.05 | 18.9 |
| KXG29223 | Sorghum | cytosol | 23.16 | 18.57 |
| OQU91407 | Sorghum | nucleus | 22.28 | 18.51 |
| KXG29224 | Sorghum | nucleus | 22.11 | 18.18 |
| OQU84114 | Sorghum | mitochondrion | 15.26 | 18.16 |
| OQU84112 | Sorghum | cytosol | 22.81 | 18.13 |
| OQU84105 | Sorghum | cytosol | 23.16 | 18.08 |
| OQU83978 | Sorghum | mitochondrion | 19.65 | 17.69 |
| EES16206 | Sorghum | cytosol | 22.63 | 17.67 |
| KXG38064 | Sorghum | nucleus | 22.28 | 17.64 |
| EES09053 | Sorghum | cytosol | 19.65 | 17.5 |
| EER91260 | Sorghum | nucleus | 21.93 | 17.34 |
| OQU90003 | Sorghum | cytosol | 23.16 | 17.1 |
| OQU92829 | Sorghum | cytosol | 21.93 | 17.03 |
| EES01740 | Sorghum | cytosol | 24.04 | 16.98 |
| OQU91406 | Sorghum | nucleus | 22.11 | 16.84 |
| EES18880 | Sorghum | cytosol | 21.75 | 16.73 |
| EES18882 | Sorghum | cytosol | 21.4 | 16.64 |
| OQU81651 | Sorghum | cytosol | 20.0 | 16.29 |
| OQU84106 | Sorghum | cytosol, endoplasmic reticulum, plastid | 22.98 | 16.27 |
| KXG36217 | Sorghum | cytosol | 22.46 | 15.42 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:8084092 | UniProt:C5XAU2 | EnsemblPlants:EER97346 | ProteinID:EER97346 | ProteinID:EER97346.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 |
| PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF18 | EnsemblPlantsGene:SORBI_3002G330300 | unigene:Sbi.19202 |
| InterPro:TF_GRAS | UniParc:UPI0001A83637 | RefSeq:XP_002460825.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:69901272..69905698
Molecular Weight (calculated)
64512.8 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.461
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLHQLLKYR LTGANVFYEF PTENNLANTP WPASPLKSEF SGSPYTPLSS QLECDNLSAL SNTPDNQSST ETISAQPISP LEVDSSYRQA AILRENTQVR
101: PDPLYATSRH NMQHALREIE TVLMAPDAED AATSTKHEFE EHKPAQLMRQ RSRTWSHESR QPSPGVVRTQ FASGYPTASY EFRPEKRLRE LREDPQSMVK
201: QLLTKCAEAL SEERIEEFLT LVQQARGVVS ITGEPIQRLG AYLLEGLVAR HANSGTNIYR ALKCREPESN ELLSYMKILY NICPYFKFGY MAANGAIAEA
301: LRNEDKIHII DFQIAQGTQW ITLIQALAAK PGGPPHVRIT GIDDPVSEYA RGEGLDLVGK MLKSMSEEFR IPLEFTPLPG IYATQVTKEM LDIRPGEALA
401: VNFTLQLHHT PDESVDVSNP RDGLLRMVKG LSPKVTTLVE QESHTNTTPF LMRFTETLDY YSAMFESIDA NLPRENKERI NVEQHCLAKD IVNIIACEGK
501: DRVERHELLG KWRSRLTMAG FRPYPLSSYV NSVIRNLLAY YSDKYTLEEK DGAMLLGWKN RKLISASAWH
101: PDPLYATSRH NMQHALREIE TVLMAPDAED AATSTKHEFE EHKPAQLMRQ RSRTWSHESR QPSPGVVRTQ FASGYPTASY EFRPEKRLRE LREDPQSMVK
201: QLLTKCAEAL SEERIEEFLT LVQQARGVVS ITGEPIQRLG AYLLEGLVAR HANSGTNIYR ALKCREPESN ELLSYMKILY NICPYFKFGY MAANGAIAEA
301: LRNEDKIHII DFQIAQGTQW ITLIQALAAK PGGPPHVRIT GIDDPVSEYA RGEGLDLVGK MLKSMSEEFR IPLEFTPLPG IYATQVTKEM LDIRPGEALA
401: VNFTLQLHHT PDESVDVSNP RDGLLRMVKG LSPKVTTLVE QESHTNTTPF LMRFTETLDY YSAMFESIDA NLPRENKERI NVEQHCLAKD IVNIIACEGK
501: DRVERHELLG KWRSRLTMAG FRPYPLSSYV NSVIRNLLAY YSDKYTLEEK DGAMLLGWKN RKLISASAWH
001: MYKQPRQELE AYYFEPNSVE KLRYLPVNNS RKRFCTLEPF PDSPPYNALS TATYDDTCGS CVTDELNDFK HKIREIETVM MGPDSLDLLV DCTDSFDSTA
101: SQEINGWRST LEAISRRDLR ADLVSCAKAM SENDLMMAHS MMEKLRQMVS VSGEPIQRLG AYLLEGLVAQ LASSGSSIYK ALNRCPEPAS TELLSYMHIL
201: YEVCPYFKFG YMSANGAIAE AMKEENRVHI IDFQIGQGSQ WVTLIQAFAA RPGGPPRIRI TGIDDMTSAY ARGGGLSIVG NRLAKLAKQF NVPFEFNSVS
301: VSVSEVKPKN LGVRPGEALA VNFAFVLHHM PDESVSTENH RDRLLRMVKS LSPKVVTLVE QESNTNTAAF FPRFMETMNY YAAMFESIDV TLPRDHKQRI
401: NVEQHCLARD VVNIIACEGA DRVERHELLG KWRSRFGMAG FTPYPLSPLV NSTIKSLLRN YSDKYRLEER DGALYLGWMH RDLVASCAWK
101: SQEINGWRST LEAISRRDLR ADLVSCAKAM SENDLMMAHS MMEKLRQMVS VSGEPIQRLG AYLLEGLVAQ LASSGSSIYK ALNRCPEPAS TELLSYMHIL
201: YEVCPYFKFG YMSANGAIAE AMKEENRVHI IDFQIGQGSQ WVTLIQAFAA RPGGPPRIRI TGIDDMTSAY ARGGGLSIVG NRLAKLAKQF NVPFEFNSVS
301: VSVSEVKPKN LGVRPGEALA VNFAFVLHHM PDESVSTENH RDRLLRMVKS LSPKVVTLVE QESNTNTAAF FPRFMETMNY YAAMFESIDV TLPRDHKQRI
401: NVEQHCLARD VVNIIACEGA DRVERHELLG KWRSRFGMAG FTPYPLSPLV NSTIKSLLRN YSDKYRLEER DGALYLGWMH RDLVASCAWK
Arabidopsis Description
PAT1Scarecrow-like transcription factor PAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDL7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.