CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29219	Sorghum	cytosol	57.42	56.17
EES09053	Sorghum	cytosol	50.0	52.66
OQU84112	Sorghum	cytosol	53.12	49.93
OQU84113	Sorghum	cytosol, nucleus, plastid	46.88	49.45
OQU84105	Sorghum	cytosol	53.56	49.45
OQU84115	Sorghum	cytosol	35.61	49.28
KXG29223	Sorghum	cytosol	51.78	49.09
KXG29224	Sorghum	nucleus	50.3	48.92
OQU90003	Sorghum	cytosol	54.15	47.28
KXG29228	Sorghum	cytosol	43.18	47.01
OQU84120	Sorghum	nucleus	44.07	46.85
OQU84116	Sorghum	nucleus	42.58	46.37
GSMUA_Achr5P08320_001	Banana	cytosol	30.56	45.88
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	54.15	45.34
OQU83981	Sorghum	cytosol	33.38	45.27
KXG26392	Sorghum	cytosol	41.69	44.32
EES16206	Sorghum	cytosol	47.92	44.25
KXG36217	Sorghum	cytosol	53.41	43.37
OQU83980	Sorghum	cytosol	39.76	43.16
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	40.65	43.15
OQU84114	Sorghum	mitochondrion	30.56	43.01
OQU83979	Sorghum	plastid	38.28	42.5
KXG29232	Sorghum	cytosol	41.99	41.62
OQU83978	Sorghum	mitochondrion	38.87	41.39
OQU81651	Sorghum	cytosol	40.21	38.71
KXG21080	Sorghum	cytosol	34.72	37.38
KXG38103	Sorghum	cytosol	34.57	37.22
KXG21079	Sorghum	cytosol	34.27	37.08
KXG37250	Sorghum	cytosol	35.46	36.71
OQU92829	Sorghum	cytosol	39.76	36.51
EES01740	Sorghum	cytosol	40.95	34.2
EER91260	Sorghum	nucleus	33.38	31.21
OQU91407	Sorghum	nucleus	31.75	31.2
KXG38064	Sorghum	nucleus	32.64	30.56
EES18882	Sorghum	cytosol	31.16	28.65
OQU91406	Sorghum	nucleus	31.45	28.34
EES18880	Sorghum	cytosol	30.86	28.07
EER97449	Sorghum	cytosol	20.33	25.05
EER95348	Sorghum	cytosol	19.14	24.07
EES18257	Sorghum	cytosol	20.03	23.98
KXG33821	Sorghum	cytosol	19.44	23.02
EER97346	Sorghum	cytosol	19.14	22.63
EES05727	Sorghum	cytosol	20.47	21.94
EES12703	Sorghum	cytosol, nucleus, plastid	17.51	18.1

Protein Annotations

EnsemblPlants:OQU84111	EnsemblPlantsGene:SORBI_3005G229900	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU84111	ProteinID:OQU84111.1	SEG:seg
UniParc:UPI0003C6A50A	UniProt:A0A1Z5RKL0	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71677259..71679283

Molecular Weight (calculated)

74967.6 Da

IEP (calculated)

5.788

GRAVY (calculated)

-0.418

Length

674 amino acids

Sequence
(BLAST)

001: MAAAPEDGEP EPFSPSVFLD LPPTPRVEGD DDDPPLLTDD LVLPYISRML MEEDMDDDRF FYHYPDHPAL LQAQQPFADI LSGSGSGSAN GSGTTFTPSS
101: PSSSSSYVNV VVPAFATATW PYDPLELTQR LTAGAAQEAG SQFFQSTDKG SQSRHVQNRV SMEDMINQAF LKGMEEANKL LPGTSSSSSN KDGALLFGET
201: NHGHGNSRGR RKNRRHDDFL EEGGETGRKS KLMAPEPEET GEMVDKMVID GYNLCVNKMK TLSITTPTTK EVNNKNSSNL STLLIHCAEA VSMDDHATAA
301: QLLAQIKKLS SPRGDANQRL ASCFAEGLEA RLAGTGSTLY SSLVAKRSTS VTEFLKAYQL YLAVSCFKMT AYRFSNMTIS KAIAGKKKLH IVDYGVLYGC
401: QWPNLLHYLA NRRGGPPEVR MTCIDLPEPG FRPTARVDET GRRLSKFARQ CGLPFKFHGI AAKWETVRAD DLDIDADEVL VVNSINKFEN LMDEAGIDDD
501: IHRPSPRDVV LRNIRKMMRP PAAAADVFIH SVVNCSYATP FFVARFREAL FHYSAMFDML DATVSRDSDL RVAVERDLVG WCALNVVACE GADRVERPET
601: YRQWQARNRK AGLRQLPFFP NAEKILREKM RNEYHKDFVI DVENNWLLQG WKGRILYAMS TWAAADDNTI SSEL

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.