Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136500.1 | Wheat | peroxisome | 90.9 | 95.05 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 95.26 | 94.67 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 88.15 | 89.16 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 38.9 | 62.65 |
| OQU84105 | Sorghum | cytosol | 55.61 | 61.1 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 56.86 | 60.96 |
| Zm00001d048604_P001 | Maize | cytosol | 55.11 | 57.78 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 27.56 | 54.57 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 45.89 | 54.52 |
| KXG36217 | Sorghum | cytosol | 55.61 | 53.73 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 43.14 | 53.31 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 36.91 | 49.01 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 39.03 | 48.68 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 38.15 | 47.59 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 39.53 | 47.53 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 29.18 | 46.99 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 43.39 | 46.77 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 24.56 | 43.88 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 32.92 | 40.31 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 35.29 | 36.47 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 35.16 | 35.7 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 28.3 | 32.15 |
| Zm00001d048603_P001 | Maize | cytosol | 56.61 | 31.9 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 28.68 | 31.9 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 26.68 | 29.64 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 15.21 | 28.64 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 25.44 | 28.49 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 16.83 | 26.95 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 17.58 | 25.45 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 15.84 | 23.01 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 13.84 | 22.7 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 15.96 | 22.46 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 14.46 | 18.38 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G176200.1 | EnsemblPlantsGene:TraesCS4A01G176200 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4A:+:447777037..447779887
Molecular Weight (calculated)
88199.0 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.415
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPDEFLR AGDAEPFSPS LFLDLPPTPS PPRAPASDDL DFISRMLMEE DIDDRFFYQY PDHPAILSAQ HRFAQIISDS NTNPSTDDSA VASSTFSSDS
101: ATARSASSCS DSATNTAKST SSSHSATTNT ANSTSCSPSP GGFGPANPTW PYERIDLSQP LHSPPYIGLG FPVDGANNLL FSGVSTPTSG YFGHTPALSR
201: GNSNHFVAPA GQNGRSTGIQ SFATFSNSSA TKDAKTLSNN ATAKAAKPAT QAACRGGPGT PASAFFFNGQ TDGDMDMLNM AFRKGMEEAN KFLPTNNTLD
301: AISNRPALRD LTCDQLKKEE ADRLRMLMFS NGRGRKNRHG VEDLEAEAGR RSKLMMPEQE ESGVGEMVEE IMLHGHDIIM KGIEDLQIAM GTEAEKNHRK
401: GTGKAARGRR GATEVDLRTM LIHCAQAVAT GDHRGSNELL RQIKQHSSPK GDATQRLAYC FAEGLEARLA GTGSHVYRSL VAKSTSVGEF LRAYKLYMAA
501: SSFRKVNFIF VGKIIMDAMV GKSRLHIVDY NVEYGFQWPD LLQMLAEREG GPPEVRITGI DVPQPGFRPA FQIEETGRRL SKCAQEFGVP FRYHGIPAKL
601: ETVHAEDLNI DPNEVLIVTS QCGFSNLMDE SVIMDRQDIP SPRDMVLTNI RNMRPDVFID CVVNGTYSAP FFVTRFREAL FTYSAQFDML DATIPRDNDD
701: RLLIERDIFG PCALNVIACE DADRVDRPET YKQWQVRGHR AGLRQVPLSS AVVKLVKDKV KSLYHKDFLI DVDNRWLLQG WKGRVLYAMS TWVAGDHDIS
801: KF
101: ATARSASSCS DSATNTAKST SSSHSATTNT ANSTSCSPSP GGFGPANPTW PYERIDLSQP LHSPPYIGLG FPVDGANNLL FSGVSTPTSG YFGHTPALSR
201: GNSNHFVAPA GQNGRSTGIQ SFATFSNSSA TKDAKTLSNN ATAKAAKPAT QAACRGGPGT PASAFFFNGQ TDGDMDMLNM AFRKGMEEAN KFLPTNNTLD
301: AISNRPALRD LTCDQLKKEE ADRLRMLMFS NGRGRKNRHG VEDLEAEAGR RSKLMMPEQE ESGVGEMVEE IMLHGHDIIM KGIEDLQIAM GTEAEKNHRK
401: GTGKAARGRR GATEVDLRTM LIHCAQAVAT GDHRGSNELL RQIKQHSSPK GDATQRLAYC FAEGLEARLA GTGSHVYRSL VAKSTSVGEF LRAYKLYMAA
501: SSFRKVNFIF VGKIIMDAMV GKSRLHIVDY NVEYGFQWPD LLQMLAEREG GPPEVRITGI DVPQPGFRPA FQIEETGRRL SKCAQEFGVP FRYHGIPAKL
601: ETVHAEDLNI DPNEVLIVTS QCGFSNLMDE SVIMDRQDIP SPRDMVLTNI RNMRPDVFID CVVNGTYSAP FFVTRFREAL FTYSAQFDML DATIPRDNDD
701: RLLIERDIFG PCALNVIACE DADRVDRPET YKQWQVRGHR AGLRQVPLSS AVVKLVKDKV KSLYHKDFLI DVDNRWLLQG WKGRVLYAMS TWVAGDHDIS
801: KF
001: MLRGGEQFGQ PANEILVRSM FSDAESVLQF KRGLEEASKF LPNTDQWIFN LEPEMERVVP VKVEEGWSAI SKTRKNHHER EEEEDDLEEA RRRSKQFAVN
101: EEDGKLTEMF DKVLLLDGEC DPQIIEDGEN GSSKALVKKG RAKKKSRAVD FRTLLTLCAQ SVSAGDKITA DDLLRQIRKQ CSPVGDASQR LAHFFANALE
201: ARLEGSTGTM IQSYYDSISS KKRTAAQILK SYSVFLSASP FMTLIYFFSN KMILDAAKDA SVLHIVDFGI LYGFQWPMFI QHLSKSNPGL RKLRITGIEI
301: PQHGLRPTER IQDTGRRLTE YCKRFGVPFE YNAIASKNWE TIKMEEFKIR PNEVLAVNAV LRFKNLRDVI PGEEDCPRDG FLKLIRDMNP NVFLSSTVNG
401: SFNAPFFTTR FKEALFHYSA LFDLFGATLS KENPERIHFE GEFYGREVMN VIACEGVDRV ERPETYKQWQ VRMIRAGFKQ KPVEAELVQL FREKMKKWGY
501: HKDFVLDEDS NWFLQGWKGR ILFSSSCWVP S
101: EEDGKLTEMF DKVLLLDGEC DPQIIEDGEN GSSKALVKKG RAKKKSRAVD FRTLLTLCAQ SVSAGDKITA DDLLRQIRKQ CSPVGDASQR LAHFFANALE
201: ARLEGSTGTM IQSYYDSISS KKRTAAQILK SYSVFLSASP FMTLIYFFSN KMILDAAKDA SVLHIVDFGI LYGFQWPMFI QHLSKSNPGL RKLRITGIEI
301: PQHGLRPTER IQDTGRRLTE YCKRFGVPFE YNAIASKNWE TIKMEEFKIR PNEVLAVNAV LRFKNLRDVI PGEEDCPRDG FLKLIRDMNP NVFLSSTVNG
401: SFNAPFFTTR FKEALFHYSA LFDLFGATLS KENPERIHFE GEFYGREVMN VIACEGVDRV ERPETYKQWQ VRMIRAGFKQ KPVEAELVQL FREKMKKWGY
501: HKDFVLDEDS NWFLQGWKGR ILFSSSCWVP S
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.