Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84105 | Sorghum | cytosol | 44.48 | 86.71 |
| Zm00001d048604_P001 | Maize | cytosol | 36.54 | 67.97 |
| Os11t0705200-01 | Rice | cytosol | 31.41 | 64.6 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 32.05 | 62.55 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 31.97 | 61.9 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 30.29 | 61.4 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 31.76 | 61.25 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 32.12 | 61.1 |
| Zm00001d030744_P001 | Maize | cytosol | 20.45 | 59.15 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 32.61 | 58.51 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 31.13 | 57.76 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 32.75 | 57.74 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 31.9 | 56.61 |
| Zm00001d048601_P001 | Maize | cytosol | 24.31 | 53.89 |
| Zm00001d048588_P001 | Maize | cytosol | 23.54 | 52.84 |
| Zm00001d041536_P001 | Maize | cytosol | 25.65 | 51.41 |
| Zm00001d048602_P001 | Maize | cytosol | 23.75 | 50.75 |
| Zm00001d003553_P001 | Maize | cytosol | 21.01 | 49.26 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 14.48 | 45.88 |
| Zm00001d048681_P001 | Maize | cytosol | 18.2 | 45.52 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 17.29 | 45.47 |
| Zm00001d048682_P001 | Maize | nucleus | 20.1 | 45.47 |
| Zm00001d048600_P001 | Maize | nucleus | 20.59 | 45.43 |
| Zm00001d007713_P001 | Maize | cytosol | 18.97 | 45.08 |
| Zm00001d034664_P001 | Maize | plastid | 16.02 | 40.79 |
| Zm00001d011070_P001 | Maize | cytosol | 17.01 | 38.6 |
| Zm00001d028603_P001 | Maize | cytosol | 19.89 | 38.56 |
| Zm00001d035671_P001 | Maize | cytosol | 16.51 | 37.54 |
| Zm00001d042907_P001 | Maize | cytosol | 20.59 | 36.22 |
| Zm00001d047813_P002 | Maize | nucleus | 20.1 | 34.5 |
| Zm00001d033166_P001 | Maize | nucleus | 17.36 | 33.74 |
| Zm00001d035670_P001 | Maize | cytosol | 16.09 | 31.54 |
| Zm00001d021946_P001 | Maize | cytosol | 10.54 | 26.88 |
| Zm00001d006701_P001 | Maize | cytosol | 10.19 | 26.17 |
| Zm00001d030500_P001 | Maize | nucleus | 9.84 | 25.83 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 9.56 | 25.37 |
| Zm00001d038225_P001 | Maize | cytosol | 9.28 | 23.53 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 9.42 | 21.72 |
| Zm00001d051461_P001 | Maize | cytosol | 8.85 | 20.76 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 8.22 | 18.78 |
| Zm00001d002573_P001 | Maize | cytosol | 8.08 | 18.46 |
Protein Annotations
| EnsemblPlants:Zm00001d048603_P001 | EnsemblPlants:Zm00001d048603_T001 | EnsemblPlantsGene:Zm00001d048603 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:AQK48246.1 | SEG:seg |
| UniParc:UPI000843757F | UniProt:A0A1D6PN07 | MapMan:15.5.12 | : | : | : |
Description
GRAS-transcription factor 83
Coordinates
chr4:-:1051644..1057496
Molecular Weight (calculated)
156378.0 Da
IEP (calculated)
4.621
GRAVY (calculated)
-0.304
Length
1423 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSAAPDEFLA QGTYLAAPEP FSPSIFLDLP PTPRPNGDDP TSDDPASSDD LVLPFISRML MEEDIDDKFF YQFPDHPALL SAQQPYAQIL SDATASSSSD
0101: SATAISSGTV GNSTLSSSSL AAASAEPTWP YDPIELSQLL RSPPYPDMGV GLDDFTTEEV NAVFLPGQDA AFQPSPAFFV TGGSGQRLSA SLTAQNVGGV
0201: GAQQQRVSLV AQDAGDSVAI QRSAFLNGAE ETKTEATTLP AGDGDHAALL SAFLGAQNGE NMDMLNVAFL KGMEEAKKFL PTNNSLLVDL DDTYGQSLPT
0301: DRDTKPCTAF AATQVKEEEV VVDVISMFGG SSNGRGRKNS HTQEDLESEM GRNSKLMMPE QEETGASELF DELMSCKYDG FLKHMQDLRI AMDSESEKSV
0401: RRVSGKGARG KQHGNEFVDL HTMLIHCAQA MATGDRRSAT EMLKQIKQHS SLRGDATQRL AYCFAEGLEV RLAGTGSQVY QSLMAKRTSV VEFLKAYKLF
0501: LAAISLNKVH IIFSNGNIVD AVAGRSKLHI VAYGVQYGLQ WPGLLHFLAG REGGPPEVRF TGIDLPQPGF RPAYQIEETG RRLSNCAREF GVPFKFHAIA
0601: AKWEMVSAED LNIDPDEVLV VNSDCHLSNL MDEGVDADTP SPRDLVLNNI RKMRPNIFIQ IVNSGTYGAP FFLTRFREAL FYYSALFDML DATIPRDNDE
0701: RLLIERDIVG RSALNVIACE GADSIAGLGI FISRAAAMAA APEAEGLFGD PEPFSPSIFL DLPPTPRPDG NDEVPASSDD LVLPFITRIL MEEDINDQFF
0801: YQFPDHPVLL RAQEPYAQIL SEPATARAAS GSPATVSPSS DEDPVQPLLS PPYPDTGLRD INDDGVGASP GFEQSDPGKL RTAALGLPTG DGDRAALAPV
0901: FFNSGDADAE MLNKAFLKGM EEAKKFLPTT SSSLLIYPPG AEEELGINGR GRKDRDRLGW DDLEAETFRK SKLMVPEPEE TDEMVDQMIF NGLEMCLREM
1001: KALRISMGSG EAKKNSRKGK QGRRSSADEA VELSTLLVHC AQAVATDNRR SATELLRQIK QQSSPKGDAT QRLAHCFAEG LEARLAGSGS QLYRSLMAER
1101: IPAMEYLRAY WLYLAACCFK MTAFSFSNKT ILKAIAGRRK VHIVDYGIDY GVQWPSLLGR VATMDMEGGP PEVRITGIDL PQPGFRPAAR IDETGRRLSD
1201: YARQIGVPFK FRGITARWDA VGADDLSIDP DEVLIVNSIV RFGNLMDEGA DIDSPSARDV VLGAIREARP DAFILHVMNV SYGAPFFVTR FREALFFYSA
1301: MFDMLDATAP RDSRQRFMVE RGFFRQCALN VVACEGVDRV ERPETYRQWQ ARNRRAGLRQ LPLDPDTVRA LREKVREQYH RDFVIDTDRD WLLEGWKGRI
1401: LYAMSTWVAD DDAVSEHHHT YTY
0101: SATAISSGTV GNSTLSSSSL AAASAEPTWP YDPIELSQLL RSPPYPDMGV GLDDFTTEEV NAVFLPGQDA AFQPSPAFFV TGGSGQRLSA SLTAQNVGGV
0201: GAQQQRVSLV AQDAGDSVAI QRSAFLNGAE ETKTEATTLP AGDGDHAALL SAFLGAQNGE NMDMLNVAFL KGMEEAKKFL PTNNSLLVDL DDTYGQSLPT
0301: DRDTKPCTAF AATQVKEEEV VVDVISMFGG SSNGRGRKNS HTQEDLESEM GRNSKLMMPE QEETGASELF DELMSCKYDG FLKHMQDLRI AMDSESEKSV
0401: RRVSGKGARG KQHGNEFVDL HTMLIHCAQA MATGDRRSAT EMLKQIKQHS SLRGDATQRL AYCFAEGLEV RLAGTGSQVY QSLMAKRTSV VEFLKAYKLF
0501: LAAISLNKVH IIFSNGNIVD AVAGRSKLHI VAYGVQYGLQ WPGLLHFLAG REGGPPEVRF TGIDLPQPGF RPAYQIEETG RRLSNCAREF GVPFKFHAIA
0601: AKWEMVSAED LNIDPDEVLV VNSDCHLSNL MDEGVDADTP SPRDLVLNNI RKMRPNIFIQ IVNSGTYGAP FFLTRFREAL FYYSALFDML DATIPRDNDE
0701: RLLIERDIVG RSALNVIACE GADSIAGLGI FISRAAAMAA APEAEGLFGD PEPFSPSIFL DLPPTPRPDG NDEVPASSDD LVLPFITRIL MEEDINDQFF
0801: YQFPDHPVLL RAQEPYAQIL SEPATARAAS GSPATVSPSS DEDPVQPLLS PPYPDTGLRD INDDGVGASP GFEQSDPGKL RTAALGLPTG DGDRAALAPV
0901: FFNSGDADAE MLNKAFLKGM EEAKKFLPTT SSSLLIYPPG AEEELGINGR GRKDRDRLGW DDLEAETFRK SKLMVPEPEE TDEMVDQMIF NGLEMCLREM
1001: KALRISMGSG EAKKNSRKGK QGRRSSADEA VELSTLLVHC AQAVATDNRR SATELLRQIK QQSSPKGDAT QRLAHCFAEG LEARLAGSGS QLYRSLMAER
1101: IPAMEYLRAY WLYLAACCFK MTAFSFSNKT ILKAIAGRRK VHIVDYGIDY GVQWPSLLGR VATMDMEGGP PEVRITGIDL PQPGFRPAAR IDETGRRLSD
1201: YARQIGVPFK FRGITARWDA VGADDLSIDP DEVLIVNSIV RFGNLMDEGA DIDSPSARDV VLGAIREARP DAFILHVMNV SYGAPFFVTR FREALFFYSA
1301: MFDMLDATAP RDSRQRFMVE RGFFRQCALN VVACEGVDRV ERPETYRQWQ ARNRRAGLRQ LPLDPDTVRA LREKVREQYH RDFVIDTDRD WLLEGWKGRI
1401: LYAMSTWVAD DDAVSEHHHT YTY
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.