Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G174300.1 | Wheat | cytosol | 93.36 | 94.51 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 92.41 | 92.79 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 93.22 | 91.98 |
| Os11t0705200-01 | Rice | cytosol | 59.76 | 63.73 |
| OQU84105 | Sorghum | cytosol | 58.27 | 58.9 |
| Zm00001d048604_P001 | Maize | cytosol | 59.89 | 57.78 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 63.14 | 57.74 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 47.02 | 55.17 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 49.73 | 54.45 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 48.37 | 54.01 |
| KXG36217 | Sorghum | cytosol | 60.43 | 53.73 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 40.65 | 52.91 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 39.57 | 50.0 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 39.97 | 49.92 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.59 | 46.99 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 25.61 | 45.76 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 34.82 | 39.12 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 38.21 | 36.34 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 38.75 | 35.09 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 31.84 | 33.38 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 31.17 | 31.81 |
| Zm00001d048603_P001 | Maize | cytosol | 61.25 | 31.76 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 29.81 | 29.06 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 28.32 | 28.99 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 28.59 | 28.98 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 27.91 | 28.81 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 19.38 | 25.81 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 19.11 | 25.54 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 18.02 | 24.77 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 18.02 | 23.33 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 16.94 | 19.81 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G078300.1 | EnsemblPlantsGene:TraesCS7B01G078300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr7B:+:88245247..88247463
Molecular Weight (calculated)
81022.4 Da
IEP (calculated)
4.754
GRAVY (calculated)
-0.434
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATPEEFEP LSPSLFLDLP PTPPPAADVD LDFISRMLME EDIDDKFFYQ YPDQPAILDA QRPYEQIISD TTTSSSGSPN GTTSSDGNAI SSSNAATSSS
101: EETNNSSWPY DPLELSQLLR SPPYLDDMVF GGLVPDSPAD EDARSSFLAD APAAGFQQSP TQLMGAADGA GAFFGQNGGS PGTQSSAVLN GPAEEKGAER
201: KPAMFSAGDG GQVGLLSAFF SNGGDMDMLN SAFLKGMEEA NKFLPTNNTL LEATPGKERG STVKKEEAAN GTPPSGNGRG RRYRYDEDDL EAETTRSSKL
301: MMPDIEETGA REMFDEIMLE GYETCMQGIE ELRLAMDNEA KKKSGKAARA KKSEAVDLRT MLVHCAQAVA AGDRRGATEL LRQIKQHSGP TGDATQRLAH
401: CFAEGLEARL AGTGSQVYQS LVAKRTSVVE FLKAYKLFMA ACCFKKANFG FANKTILNAV AGKRRLHIVD FGVQYGLQWP GLMRWLAQRD GGPPEVRITG
501: VDLPQPGFRP ARQVEETGRR LSSCARELGV PFKFHGVTAR WDTVRGEDLG IDPDEVFVVH CQCGLRNLMD DSVAVTTGGP SPRDVVLRNI RDMRPDVFVE
601: CVANGAYGAP FFVTRFREAM FFYSAHFDML DATIPRDNDV RLLIERDLIG PGALNVIACE GADRVERPET YRQWQVRNRR AGLRQLPLDP EVVGMVREKV
701: REHYHKDFLI DVDHQWLLQG WKGRVLYALS TWVADHDS
101: EETNNSSWPY DPLELSQLLR SPPYLDDMVF GGLVPDSPAD EDARSSFLAD APAAGFQQSP TQLMGAADGA GAFFGQNGGS PGTQSSAVLN GPAEEKGAER
201: KPAMFSAGDG GQVGLLSAFF SNGGDMDMLN SAFLKGMEEA NKFLPTNNTL LEATPGKERG STVKKEEAAN GTPPSGNGRG RRYRYDEDDL EAETTRSSKL
301: MMPDIEETGA REMFDEIMLE GYETCMQGIE ELRLAMDNEA KKKSGKAARA KKSEAVDLRT MLVHCAQAVA AGDRRGATEL LRQIKQHSGP TGDATQRLAH
401: CFAEGLEARL AGTGSQVYQS LVAKRTSVVE FLKAYKLFMA ACCFKKANFG FANKTILNAV AGKRRLHIVD FGVQYGLQWP GLMRWLAQRD GGPPEVRITG
501: VDLPQPGFRP ARQVEETGRR LSSCARELGV PFKFHGVTAR WDTVRGEDLG IDPDEVFVVH CQCGLRNLMD DSVAVTTGGP SPRDVVLRNI RDMRPDVFVE
601: CVANGAYGAP FFVTRFREAM FFYSAHFDML DATIPRDNDV RLLIERDLIG PGALNVIACE GADRVERPET YRQWQVRNRR AGLRQLPLDP EVVGMVREKV
701: REHYHKDFLI DVDHQWLLQG WKGRVLYALS TWVADHDS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.