Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84105 | Sorghum | cytosol | 63.87 | 60.55 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 63.15 | 59.95 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 63.73 | 59.76 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 63.01 | 59.32 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 63.87 | 59.09 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 59.83 | 58.97 |
| Zm00001d048604_P001 | Maize | cytosol | 63.01 | 56.99 |
| Os11t0705900-01 | Rice | cytosol | 51.3 | 55.3 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 62.72 | 54.73 |
| KXG36217 | Sorghum | cytosol | 63.58 | 53.01 |
| Os12t0573200-01 | Rice | cytosol, plasma membrane | 55.35 | 51.9 |
| Os11t0706200-00 | Rice | nucleus | 42.2 | 49.24 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 30.49 | 46.99 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 39.16 | 42.61 |
| Os03t0690600-03 | Rice | cytosol | 41.47 | 39.26 |
| Os01t0842200-01 | Rice | cytosol | 42.49 | 35.85 |
| Os11t0139600-01 | Rice | nucleus | 29.05 | 34.48 |
| Zm00001d048603_P001 | Maize | cytosol | 64.6 | 31.41 |
| Os07t0583600-01 | Rice | plasma membrane | 20.81 | 26.47 |
| Os03t0193000-01 | Rice | plastid | 19.94 | 25.79 |
| Os01t0881500-01 | Rice | cytosol | 19.22 | 24.05 |
| Os07t0545800-01 | Rice | cytosol, nucleus | 19.51 | 23.64 |
| Os02t0681900-01 | Rice | cytosol | 17.49 | 19.58 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 16.76 | 18.74 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:4351217 | ProteinID:AAX95274.1 | ProteinID:ABA95512.1 | ProteinID:BAF28911.1 | ProteinID:BAT15406.1 |
| ProteinID:EAZ19321.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR005202 | EnsemblPlantsGene:Os11g0705200 | EnsemblPlants:Os11t0705200-01 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF59 | UniProt:Q53MB0 | InterPro:TF_GRAS | UniParc:UPI000050945F | RefSeq:XP_015617900.1 | SEG:seg |
Description
Similar to Scarecrow-like 9 (Fragment). (Os11t0705200-01)
Coordinates
chr11:+:28870115..28872329
Molecular Weight (calculated)
77446.4 Da
IEP (calculated)
4.783
GRAVY (calculated)
-0.394
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAPQLEE LVDLEPFSPS LFLDLPPTPH SDDPNDDDLI LPFISRMLME DDIDDKFFYQ FPDHPALLHA QQPYAQILDA PSDDTTTNSS DDSASATTNN
101: TTNSAAAANA SWPYDPIELS QLLQSPPHPV SDNHDADVGD TRSAPEDDKD LKLLFSAADN MEMLNMAFLK GREEANKLVP TNNTLFAGFD GASLLKTEPA
201: VDEPTLMFGR SGGSGRGRKN RHGEEDDLEA ETGRSSKLMV PPQEATAAAS EMFDEIMFNW YEVIMKGMEE LRVAMDSEAE KKARNGGGAG RRAARAKAAV
301: VDLHTLLIHC AQAVATSDRR SATELLKQIK QNSSARGDAT QRLACCFAEG LEARLAGTGS QVYKSLVAKC TSTVDFLKAY KLFAAACCIK KVSFIFSNKT
401: ILDAVAGKRK LHIVDYGLSY GFQWPGLFKC LSEREGGPPE VRITGIDFPQ PGFRPADQIE ETGRRLSNCA RQFGVPFRFQ AIAAKWETVR REDLHLDREE
501: EEEEEEEVLV VNCLHFLNAL QDESVVVDSP SPRDMVLNNI RDMRPHVFVQ CVVNGAYGAP FFLTRFRETL FFYSSQFDML DATIPRDNDE RLLIERDILG
601: RWALNVIACE GADRVDRPET YKQWLVRNHR AGLTQLPLQP QVVELVRDKV KKLYHKDFVI DVDHNWLLQG WKGRILYAMS TWVADRDHKS LF
101: TTNSAAAANA SWPYDPIELS QLLQSPPHPV SDNHDADVGD TRSAPEDDKD LKLLFSAADN MEMLNMAFLK GREEANKLVP TNNTLFAGFD GASLLKTEPA
201: VDEPTLMFGR SGGSGRGRKN RHGEEDDLEA ETGRSSKLMV PPQEATAAAS EMFDEIMFNW YEVIMKGMEE LRVAMDSEAE KKARNGGGAG RRAARAKAAV
301: VDLHTLLIHC AQAVATSDRR SATELLKQIK QNSSARGDAT QRLACCFAEG LEARLAGTGS QVYKSLVAKC TSTVDFLKAY KLFAAACCIK KVSFIFSNKT
401: ILDAVAGKRK LHIVDYGLSY GFQWPGLFKC LSEREGGPPE VRITGIDFPQ PGFRPADQIE ETGRRLSNCA RQFGVPFRFQ AIAAKWETVR REDLHLDREE
501: EEEEEEEVLV VNCLHFLNAL QDESVVVDSP SPRDMVLNNI RDMRPHVFVQ CVVNGAYGAP FFLTRFRETL FFYSSQFDML DATIPRDNDE RLLIERDILG
601: RWALNVIACE GADRVDRPET YKQWLVRNHR AGLTQLPLQP QVVELVRDKV KKLYHKDFVI DVDHNWLLQG WKGRILYAMS TWVADRDHKS LF
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.