Factsheet for Os01t0881500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G403100.1	Wheat	cytosol	87.7	87.86
TraesCS3A01G408000.1	Wheat	cytosol	87.34	87.5
TraesCS3B01G441600.1	Wheat	cytosol	87.16	87.32
HORVU3Hr1G091250.1	Barley	cytosol	86.8	86.96
KXG33821	Sorghum	cytosol	89.15	86.64
GSMUA_Achr6P11780_001	Banana	cytosol	45.03	72.81
Zm00001d038225_P001	Maize	cytosol	72.69	71.66
Bra017915.1-P	Field mustard	cytoskeleton, cytosol, nucleus, plastid	46.47	62.99
GSMUA_Achr10P...	Banana	cytosol	61.3	61.41
VIT_04s0044g01370.t01	Wine grape	nucleus	58.05	56.51
GSMUA_Achr3P02410_001	Banana	nucleus	59.67	56.22
VIT_18s0001g15270.t01	Wine grape	cytosol, plastid	56.96	55.75
KRH64568	Soybean	cytosol	57.14	53.02
KRH53364	Soybean	cytosol	56.96	52.5
Solyc04g064550.1.1	Tomato	mitochondrion	52.98	52.04
PGSC0003DMT400063944	Potato	cytosol, mitochondrion	52.44	51.88
KRH18097	Soybean	cytosol	55.33	51.78
CDY61060	Canola	cytosol	50.09	51.39
CDY00377	Canola	cytosol	50.81	51.09
CDY68224	Canola	cytosol	52.98	50.87
CDY50240	Canola	cytosol	52.98	50.87
KRH15917	Soybean	cytosol	54.25	50.76
Bra012280.1-P	Field mustard	cytosol	49.91	50.27
AT1G21450.1	Thale cress	nucleus	52.26	48.74
Os07t0583600-01	Rice	plasma membrane	39.78	40.44
Os03t0193000-01	Rice	plastid	38.34	39.63
Os07t0545800-01	Rice	cytosol, nucleus	38.34	37.13
Os02t0681900-01	Rice	cytosol	30.2	27.02
Os04t0580300-01	Rice	cytosol, nucleus, plastid	29.29	26.17
Os11t0706200-00	Rice	nucleus	22.42	20.91
Os11t0705900-01	Rice	cytosol	22.78	19.63
Os11t0705200-01	Rice	cytosol	24.05	19.22
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	21.88	19.03
Os12t0573200-01	Rice	cytosol, plasma membrane	24.41	18.29
Os03t0690600-03	Rice	cytosol	23.15	17.51
Os01t0842200-01	Rice	cytosol	23.51	15.85
Os11t0139600-01	Rice	nucleus	15.37	14.58

Protein Annotations

MapMan:15.5.12	EntrezGene:4324850	EMBL:AK060833	EMBL:AK067457	ProteinID:BAB90355.1	ProteinID:BAC06237.1
ProteinID:BAF06914.1	ProteinID:BAS75564.1	ProteinID:EEE55762.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os01g0881500	EnsemblPlants:Os01t0881500-01	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF10	UniProt:Q8RZQ6	InterPro:Scarecrow-like_1	InterPro:TF_GRAS
UniParc:UPI00000A9DAD	RefSeq:XP_015610828.1	SEG:seg	:	:	:

Description

Arabidopsis thaliana scarecrow-like 1Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-01);Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-02)

Coordinates

chr1:-:38261869..38265489

Molecular Weight (calculated)

61801.8 Da

IEP (calculated)

4.550

GRAVY (calculated)

-0.358

Length

553 amino acids

Sequence
(BLAST)

001: MSFIRRADPS TTYADNLYIH KFGTPNSNFA ARRYASDTQL FRYGPEPYNP ENSFYNQQAS PMPYMVTADG HSPSSADNSC SDVAKDSPLV SNVSQQNSQS
101: ISDNQSSELE VEFDEDDIRM KLQELEHALL DDSDDILYEI SQAGSINDEW ADPMKNVILP NSPKESESSI SCAGSNNGEP RTPKQLLFDC AMALSDYNVD
201: EAQAIITDLR QMVSIQGDPS QRIAAYLVEG LAARIVASGK GIYKALSCKE PPTLYQLSAM QILFEICPCF RFGFMAANYA ILEACKGEDR VHIIDFDINQ
301: GSQYITLIQF LKNNANKPRH LRITGVDDPE TVQRTVGGLK VIGQRLEKLA EDCGISFEFR AVGANIGDVT PAMLDCCPGE ALVVNFAFQL HHLPDESVSI
401: MNERDQLLRM VKGLQPKLVT LVEQDANTNT APFQTRFREV YDYYAALFDS LDATLPRESP DRMNVERQCL AREIVNILAC EGPDRVERYE VAGKWRARMT
501: MAGFTPCPFS SNVISGIRSL LKSYCDRYKF EEDHGGLHFG WGEKTLIVSS AWQ

Best Arabidopsis Sequence Match ( AT1G21450.1 )
(BLAST)

001: MVEQTVVREH IKARVMSLVR SAEPSSYRNP KLYTLNENGN NNGVSSAQIF DPDRSKNPCL TDDSYPSQSY EKYFLDSPTD EFVQHPIGSG ASVSSFGSLD
101: SFPYQSRPVL GCSMEFQLPL DSTSTSSTRL LGDYQAVSYS PSMDVVEEFD DEQMRSKIQE LERALLGDED DKMVGIDNLM EIDSEWSYQN ESEQHQDSPK
201: ESSSADSNSH VSSKEVVSQA TPKQILISCA RALSEGKLEE ALSMVNELRQ IVSIQGDPSQ RIAAYMVEGL AARMAASGKF IYRALKCKEP PSDERLAAMQ
301: VLFEVCPCFK FGFLAANGAI LEAIKGEEEV HIIDFDINQG NQYMTLIRSI AELPGKRPRL RLTGIDDPES VQRSIGGLRI IGLRLEQLAE DNGVSFKFKA
401: MPSKTSIVSP STLGCKPGET LIVNFAFQLH HMPDESVTTV NQRDELLHMV KSLNPKLVTV VEQDVNTNTS PFFPRFIEAY EYYSAVFESL DMTLPRESQE
501: RMNVERQCLA RDIVNIVACE GEERIERYEA AGKWRARMMM AGFNPKPMSA KVTNNIQNLI KQQYCNKYKL KEEMGELHFC WEEKSLIVAS AWR

Arabidopsis Description

SCL1Scarecrow-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.