Factsheet for Os11t0705900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G176400.1	Wheat	cytosol	53.27	68.67
TraesCS4D01G136300.1	Wheat	cytosol	62.46	59.5
TraesCS4B01G141300.1	Wheat	cytosol	62.31	59.35
TraesCS4B01G141400.1	Wheat	cytosol	60.44	58.7
HORVU4Hr1G027610.1	Barley	cytosol	61.84	58.64
OQU84113	Sorghum	cytosol, nucleus, plastid	57.79	58.06
HORVU4Hr1G027900.1	Barley	cytosol	59.35	57.55
TraesCS4A01G176300.1	Wheat	cytosol	60.28	57.33
Zm00001d048601_P001	Maize	cytosol	57.01	57.01
TraesCS4D01G136400.1	Wheat	mitochondrion	60.28	54.35
Os11t0705200-01	Rice	cytosol	55.3	51.3
Os12t0573200-01	Rice	cytosol, plasma membrane	52.34	45.53
Os11t0706200-00	Rice	nucleus	41.43	44.86
GSMUA_Achr5P08320_001	Banana	cytosol	31.15	44.54
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	39.72	40.09
Os03t0690600-03	Rice	cytosol	41.59	36.53
Os11t0139600-01	Rice	nucleus	30.22	33.28
Os01t0842200-01	Rice	cytosol	42.21	33.05
Os07t0583600-01	Rice	plasma membrane	21.96	25.92
Os03t0193000-01	Rice	plastid	21.03	25.23
Os01t0881500-01	Rice	cytosol	19.63	22.78
Os07t0545800-01	Rice	cytosol, nucleus	19.63	22.07
Os02t0681900-01	Rice	cytosol	18.85	19.58
Os04t0580300-01	Rice	cytosol, nucleus, plastid	18.85	19.55

Protein Annotations

MapMan:15.5.12	EntrezGene:4351219	ProteinID:AAX95277.1	ProteinID:ABA95515.1	EMBL:AK063519	ProteinID:BAF28913.1
ProteinID:BAT15407.1	ProteinID:EAZ19323.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os11g0705900	EnsemblPlants:Os11t0705900-01	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF20	UniProt:Q53MB4	InterPro:TF_GRAS	UniParc:UPI0000509462	RefSeq:XP_015616926.1
SEG:seg	:	:	:	:	:

Description

GRAS transcription factor domain containing protein. (Os11t0705900-01)

Coordinates

chr11:+:28891375..28893521

Molecular Weight (calculated)

72087.6 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.421

Length

642 amino acids

Sequence
(BLAST)

001: MATTPEAAES LRFRWPAAEE EFDNDMVLPY ISRLLMEDDV HDHFFYQYPD HPALLRAQQP FAQILASSPS SAAGASSSSS SSDAPPSRPF FDDEAATAKT
101: FPTAAVHSVD HQYSGGLDMV NMAFLKGMEE ANKFLPTNTL LLSTDSSTTL QLQVQGEVVV DGHGMLGGVG GAAAAHAHGA INSKKVNCRD DDLEAGTGRA
201: TKLMAPEPEL EEEGARQMFD EMMLQEHEIC MKGVKQLSLK SKSSSSKKAR GRRTVIHTEP VDLHNLLLHC AQAVATDDRR SAHELLRQIK QHSSAWGDAG
301: QRLAHCFAQG LEARLAGTGS QVYQSLMSQR TSVVDFLKAY RLYMEACCCK KVAFVFSNKT IYDAVAGRRK LHIVDYGLSY GFQWPGLLRE LAARRGGPPE
401: VRITGIDLPQ PGFRPDQHIE ETGRRLSRYA DELGVPFKFH GIAATKKESV RREELGEAEE DEVVVVISLC HFRNVMDESL QEDSSRSPRD EVLGNIRRMR
501: PDVFIHGIMN GAYGATYFLT RFREALYYYA AQFDLLDATV GRESHERMLV ERDIFGRAAL NVIACEGAER VERPEMYKQW QARNQRAGLR QLPLNPQVVR
601: LVLDKVRDKY HKDFVVDEDQ RWLLHRWKGR VLYALSTWVA QH

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.