Factsheet for Os11t0706200-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83981	Sorghum	cytosol	41.32	49.3
KXG29228	Sorghum	cytosol	49.07	47.01
Zm00001d048681_P001	Maize	cytosol	45.03	46.92
OQU84115	Sorghum	cytosol	38.45	46.82
OQU83979	Sorghum	plastid	47.22	46.13
OQU83980	Sorghum	cytosol	48.06	45.89
Zm00001d048682_P001	Maize	nucleus	48.06	45.31
OQU83978	Sorghum	mitochondrion	48.23	45.18
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	41.15	45.1
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	48.23	45.04
Zm00001d007713_P001	Maize	cytosol	43.0	42.57
Os11t0705200-01	Rice	cytosol	49.24	42.2
Os11t0705900-01	Rice	cytosol	44.86	41.43
Os12t0573200-01	Rice	cytosol, plasma membrane	48.74	39.16
OQU81651	Sorghum	cytosol	45.87	38.86
GSMUA_Achr5P08320_001	Banana	cytosol	29.17	38.53
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	37.44	34.91
Os03t0690600-03	Rice	cytosol	38.28	31.05
Os01t0842200-01	Rice	cytosol	40.13	29.02
Os11t0139600-01	Rice	nucleus	28.33	28.82
Os07t0583600-01	Rice	plasma membrane	22.26	24.26
Os03t0193000-01	Rice	plastid	21.75	24.11
Os01t0881500-01	Rice	cytosol	20.91	22.42
Os07t0545800-01	Rice	cytosol, nucleus	21.25	22.07
Os02t0681900-01	Rice	cytosol	20.4	19.58
Os04t0580300-01	Rice	cytosol, nucleus, plastid	20.24	19.39

Protein Annotations

MapMan:15.5.12	EntrezGene:4351222	ProteinID:AAX95279.1	ProteinID:ABA95517.1	ProteinID:BAF28915.1	ProteinID:BAT15408.1
ncoils:Coil	ProteinID:EAZ19325.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os11g0706200	EnsemblPlants:Os11t0706200-00	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF124	UniProt:Q53MB2	InterPro:TF_GRAS	UniParc:UPI0000509464	RefSeq:XP_015616387.1
SEG:seg	:	:	:	:	:

Description

GRAS transcription factor domain containing protein. (Os11t0706200-00)

Coordinates

chr11:+:28899015..28900796

Molecular Weight (calculated)

66640.7 Da

IEP (calculated)

6.357

GRAVY (calculated)

-0.395

Length

593 amino acids

Sequence
(BLAST)

001: MANPEDFFWE ALLKENEAPS PPPVFFDLPA TPLSNSDGTD PSSLDNQLLS YVSRMLMEDE MGSSAAITNL QCVNRGSTEE ANNMLPGSEV VRVFSKGMGE
101: ASKLLPRNNS FRTLETVDQV SSDGHCRGRK KKNHDRDEQQ LEEELGRTSK LAALTIAGTQ EAGARELLDE LMLHAHETCI KDMEKLRIDM DNEAEKKINK
201: KDKKGSSSKV VDLRLLLIQC AQATATDNQQ SAGELLKKIK QHALATGDAM QRVAHYFAKG LEARLAGRGK HLYQNQMRMS LVEYLKVYKL YMAACCFTKV
301: ALMFAAMTIM QAVQGKKRLH IVDYGPRCGL HWPDLLRRLG SREDGPPEVR ITIVDILQPA FRPFQRIEEA GHCLSSCANE FRVPFRFQAV AAAKWETVGA
401: EDLHIEPDEV LVVNDLWSFS ALMDESVFCD GPNPRDVALR NISKMQPDVF IQGITNDSYG ASFLSRFRAV LLYYSALFDI LDATTPRDSG LRLALEQNVL
501: GPYALNAIAC EGADLVERPE KYKQWQARNH RAGMQQLKLR PDIVDTIRDE VNKYHHKDFL LGEDGQWLLQ GWMGRILFAH SAWVRQSQDT SSG

Best Arabidopsis Sequence Match ( AT2G29060.1 )
(BLAST)

001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL

Arabidopsis Description

SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.