Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G141100.1 | Wheat | cytosol | 35.51 | 32.91 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 35.85 | 32.2 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 35.68 | 32.05 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 35.68 | 31.85 |
| OQU84116 | Sorghum | nucleus | 33.28 | 31.34 |
| Os11t0705900-01 | Rice | cytosol | 33.28 | 30.22 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 22.47 | 29.18 |
| Os11t0705200-01 | Rice | cytosol | 34.48 | 29.05 |
| Os11t0706200-00 | Rice | nucleus | 28.82 | 28.33 |
| Os12t0573200-01 | Rice | cytosol, plasma membrane | 34.65 | 27.37 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 25.9 | 23.74 |
| Os03t0690600-03 | Rice | cytosol | 26.42 | 21.07 |
| Os01t0842200-01 | Rice | cytosol | 27.96 | 19.88 |
| Os07t0583600-01 | Rice | plasma membrane | 16.81 | 18.01 |
| Os03t0193000-01 | Rice | plastid | 14.75 | 16.07 |
| Os01t0881500-01 | Rice | cytosol | 14.58 | 15.37 |
| Os02t0681900-01 | Rice | cytosol | 15.78 | 14.89 |
| Os07t0545800-01 | Rice | cytosol, nucleus | 13.72 | 14.01 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 14.24 | 13.41 |
Protein Annotations
| MapMan:15.5.12 | UniProt:A0A0P0XZ47 | ProteinID:BAT12601.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | EnsemblPlantsGene:Os11g0139600 | EnsemblPlants:Os11t0139600-01 | PFAM:PF03514 |
| PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 | InterPro:TF_GRAS | UniParc:UPI0003939A8D | SEG:seg |
Description
Similar to GRAS family transcription factor containing protein. (Os11t0139600-01)
Coordinates
chr11:+:1829913..1832347
Molecular Weight (calculated)
61917.1 Da
IEP (calculated)
8.630
GRAVY (calculated)
-0.656
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPAAPPSEA AAAADDVVLP YISRILMEED IDDDMFFCLY PDHPALLEAQ QPFAQILSSS SSIAGEVNSA PMEDSAALMM QGSGNGRGRK GSKHGGDELE
101: AEVGRASKLM ATPEEEEDDD DGVGEMLEKM MLNGDEDEAF HGETNAPRVP AEKKCGKAAR RRRRQAKGEV VDLRELLMSC AQAVASGNRR SAGELLEQIK
201: RHSSPTGDAT ERLAHYFADG LEARLAGAAS LERRLVASAE ERASAMELLE AYQVFMAACC FKWVAFTFAN MAILRAAEGR NRLHIVDYGG QYHGLQWPSL
301: LQRLAEREGG PPEVRMTLVG HPQPGFRPAR RLERTGRRLS NCARAFGLPV QVPRRGGGEV GDGHRRGRRR RRPRRRGGGR RERRAQPGHP DGRERRVRRP
401: EPAGHGPGQH PRHAPGGVRP GRGERRPRRA LLPDEVPGGA LLLLGAVRHA GRDDAGGGEP PAGGAGEGRA EAGGGGGDRG GRGGAGGAAG DVQAVAGEES
501: AGGAEAGGGG GRRGGGGEEK GEEEASRGVR DRGGCRVVAA GVEGAHPVRS LGVGRGRGWC ALGSRRRWWC SCVFWDGNAC LLL
101: AEVGRASKLM ATPEEEEDDD DGVGEMLEKM MLNGDEDEAF HGETNAPRVP AEKKCGKAAR RRRRQAKGEV VDLRELLMSC AQAVASGNRR SAGELLEQIK
201: RHSSPTGDAT ERLAHYFADG LEARLAGAAS LERRLVASAE ERASAMELLE AYQVFMAACC FKWVAFTFAN MAILRAAEGR NRLHIVDYGG QYHGLQWPSL
301: LQRLAEREGG PPEVRMTLVG HPQPGFRPAR RLERTGRRLS NCARAFGLPV QVPRRGGGEV GDGHRRGRRR RRPRRRGGGR RERRAQPGHP DGRERRVRRP
401: EPAGHGPGQH PRHAPGGVRP GRGERRPRRA LLPDEVPGGA LLLLGAVRHA GRDDAGGGEP PAGGAGEGRA EAGGGGGDRG GRGGAGGAAG DVQAVAGEES
501: AGGAEAGGGG GRRGGGGEEK GEEEASRGVR DRGGCRVVAA GVEGAHPVRS LGVGRGRGWC ALGSRRRWWC SCVFWDGNAC LLL
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.