Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028603_P001 | Maize | cytosol | 84.82 | 84.47 |
| OQU92829 | Sorghum | cytosol | 84.4 | 84.06 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 80.16 | 75.71 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 80.3 | 75.64 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 80.03 | 75.39 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 79.62 | 73.95 |
| Zm00001d047813_P002 | Maize | nucleus | 83.86 | 73.94 |
| GSMUA_Achr10P... | Banana | nucleus | 41.72 | 69.0 |
| Solyc04g011630.1.1 | Tomato | cytosol | 15.6 | 67.06 |
| GSMUA_Achr10P... | Banana | cytosol | 53.63 | 65.44 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 53.35 | 65.22 |
| CDX68389 | Canola | cytosol | 6.84 | 58.82 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 31.46 | 52.04 |
| PGSC0003DMT400049420 | Potato | cytosol | 46.92 | 51.66 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 49.25 | 50.78 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 21.89 | 50.47 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 21.75 | 50.16 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 49.52 | 48.4 |
| KRH65839 | Soybean | cytosol, plastid | 48.15 | 48.22 |
| PGSC0003DMT400005480 | Potato | cytosol | 32.01 | 48.05 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 39.12 | 47.67 |
| PGSC0003DMT400016258 | Potato | cytosol | 47.33 | 47.53 |
| KRH10240 | Soybean | cytosol | 39.12 | 47.19 |
| KRH49113 | Soybean | cytosol | 47.06 | 46.87 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 40.77 | 46.86 |
| KRG99969 | Soybean | cytosol | 46.92 | 46.54 |
| Solyc09g010920.1.1 | Tomato | cytosol | 48.29 | 46.39 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 48.15 | 46.25 |
| Solyc10g086530.1.1 | Tomato | cytosol | 48.15 | 46.25 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 45.96 | 46.22 |
| KRH24780 | Soybean | cytosol | 41.59 | 46.06 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 42.13 | 45.77 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 47.47 | 45.66 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 42.0 | 45.62 |
| CDX79750 | Canola | peroxisome | 41.86 | 45.4 |
| KRH29773 | Soybean | cytosol | 38.03 | 45.28 |
| KRH23094 | Soybean | cytosol | 34.2 | 45.21 |
| KRH29771 | Soybean | cytosol | 41.59 | 44.71 |
| CDY71578 | Canola | nucleus, plastid | 31.74 | 44.53 |
| KRH23095 | Soybean | cytosol | 39.95 | 44.44 |
| PGSC0003DMT400077972 | Potato | cytosol | 45.42 | 44.15 |
| PGSC0003DMT400069949 | Potato | cytosol | 45.01 | 44.04 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 42.41 | 44.03 |
| KRH24773 | Soybean | nucleus | 41.31 | 43.96 |
| Solyc05g053090.1.1 | Tomato | cytosol | 44.6 | 43.88 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 39.4 | 43.77 |
| Solyc06g076280.1.1 | Tomato | cytosol | 44.6 | 43.58 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 42.82 | 43.53 |
| CDY47877 | Canola | nucleus | 36.8 | 43.53 |
| Os12t0573200-01 | Rice | cytosol, plasma membrane | 43.91 | 43.5 |
| KRH29775 | Soybean | nucleus | 39.95 | 43.39 |
| KRH24778 | Soybean | nucleus | 40.08 | 43.34 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 37.35 | 43.33 |
| AT2G37650.1 | Thale cress | cytosol | 42.54 | 43.31 |
| Bra028391.1-P | Field mustard | nucleus | 36.66 | 43.23 |
| CDY39530 | Canola | cytosol | 36.39 | 42.97 |
| KRH24775 | Soybean | cytosol | 39.95 | 42.94 |
| Os01t0842200-01 | Rice | cytosol | 48.02 | 42.8 |
| KRH29774 | Soybean | cytosol | 36.8 | 42.63 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 43.78 | 42.44 |
| Bra015584.1-P | Field mustard | cytosol | 25.31 | 42.43 |
| AT3G46600.1 | Thale cress | cytosol | 33.79 | 42.37 |
| CDX86475 | Canola | nucleus | 40.63 | 41.83 |
| CDY47878 | Canola | nucleus | 39.4 | 41.68 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 36.8 | 41.64 |
| Os11t0705900-01 | Rice | cytosol | 36.53 | 41.59 |
| KRH29779 | Soybean | cytosol | 42.13 | 41.51 |
| Os11t0705200-01 | Rice | cytosol | 39.26 | 41.47 |
| Bra028390.1-P | Field mustard | cytosol | 39.95 | 41.36 |
| AT2G29060.1 | Thale cress | cytosol | 38.99 | 41.07 |
| KRH10243 | Soybean | nucleus | 37.35 | 41.05 |
| Solyc06g082530.1.1 | Tomato | cytosol | 36.39 | 40.74 |
| Bra033813.1-P | Field mustard | nucleus | 32.42 | 40.72 |
| KRH23089 | Soybean | cytosol | 35.84 | 40.68 |
| Bra030688.1-P | Field mustard | nucleus | 40.77 | 40.11 |
| Solyc01g100200.2.1 | Tomato | nucleus | 36.53 | 40.09 |
| PGSC0003DMT400078286 | Potato | nucleus | 36.53 | 40.03 |
| CDY15616 | Canola | nucleus | 39.12 | 40.0 |
| CDX82987 | Canola | nucleus | 32.83 | 39.93 |
| CDX77228 | Canola | cytosol | 36.66 | 39.88 |
| Bra035653.1-P | Field mustard | cytosol | 39.26 | 39.75 |
| AT5G59450.1 | Thale cress | nucleus | 32.97 | 39.51 |
| CDY31749 | Canola | cytosol | 39.12 | 39.39 |
| KRH23090 | Soybean | vacuole | 33.38 | 39.29 |
| CDY06266 | Canola | cytosol | 33.93 | 39.24 |
| AT1G07530.1 | Thale cress | cytosol | 41.18 | 39.14 |
| CDY33040 | Canola | nucleus | 31.74 | 38.86 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 42.27 | 38.77 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 39.26 | 38.63 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 36.11 | 38.37 |
| Os11t0706200-00 | Rice | nucleus | 31.05 | 38.28 |
| AT1G07520.3 | Thale cress | cytosol | 36.25 | 38.07 |
| Bra031581.1-P | Field mustard | cytosol | 34.34 | 37.57 |
| CDY06265 | Canola | cytosol | 35.02 | 37.1 |
| Bra031580.1-P | Field mustard | cytosol | 34.88 | 36.96 |
| CDY09912 | Canola | cytosol | 34.47 | 36.0 |
| CDX68388 | Canola | cytosol | 19.97 | 35.27 |
| CDY09911 | Canola | nucleus | 26.81 | 33.56 |
| Os11t0139600-01 | Rice | nucleus | 21.07 | 26.42 |
| Os03t0193000-01 | Rice | plastid | 19.15 | 26.17 |
| Os07t0583600-01 | Rice | plasma membrane | 19.02 | 25.55 |
| Os01t0881500-01 | Rice | cytosol | 17.51 | 23.15 |
| Os07t0545800-01 | Rice | cytosol, nucleus | 17.1 | 21.89 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 15.87 | 18.74 |
| Os02t0681900-01 | Rice | cytosol | 15.46 | 18.28 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:4333775 | ProteinID:AAT81711.1 | ProteinID:ABF98288.1 | ProteinID:ABF98289.1 | EMBL:AK101402 |
| EMBL:AK101848 | ProteinID:BAF12866.1 | ProteinID:BAS85841.1 | ProteinID:EAZ28202.1 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 |
| EnsemblPlantsGene:Os03g0690600 | EnsemblPlants:Os03t0690600-03 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF44 |
| UniProt:Q6AVK7 | InterPro:TF_GRAS | UniParc:UPI0000400324 | RefSeq:XP_015630936.1 | RefSeq:XP_015630937.1 | RefSeq:XP_015630938.1 |
| RefSeq:XP_015630939.1 | RefSeq:XP_015630940.1 | RefSeq:XP_015630941.1 | RefSeq:XP_015630942.1 | RefSeq:XP_015630943.1 | RefSeq:XP_015630944.1 |
| SEG:seg | : | : | : | : | : |
Description
OsSCL14Similar to SCARECROW-like protein. (Os03t0690600-01);Similar to SCARECROW-like protein. (Os03t0690600-02);Similar to SCARECROW-like protein. (Os03t0690600-03)
Coordinates
chr3:-:27588808..27592738
Molecular Weight (calculated)
82223.2 Da
IEP (calculated)
6.880
GRAVY (calculated)
-0.483
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDNNFGEL SGMFCGLSYD GYTDHGSQSD YFRFADPQPA IVPQMDAGPS SAASSTASRA AVSSGTDNPE DWEFISDESL NYISRMLMEE DIDEKVSMYQ
101: EESAALRAAA KPFYDILGHK FPPSPDRQLV AWPLDSPSES STSSYPHSLA SSVTSSNISG AVDSSQRRYV GHSEYRSLSG HSSQPPVGPS SDVRNAMETL
201: EDPLISNGRI PEYLFESFPT WDFRRGVDEA QKFLPGSDKV VIDLEAGGVA KRQEAGKAIS LNVSKAEVLK VKKNRQSEDL DVMEGRNSKQ SAFCSDEPDW
301: IEMFDVLLRQ TEKKATDLRK MMRFEASKNS QVAQPKGPSG TRSRGRKPTK KDVVDLRTLL IHCAQAVAAD DRRTANELLK QIRQHAKPNG DGSQRLAYCF
401: ADGLEARLAG TGSQLYHKLV AKRTTASDML KAYHLYLAAC PFKRLSHFLS NQTILSLTKN ASKVHIIDFG IYFGFQWPCL IRRLFKREGG PPKLRITGID
501: VPQPGFRPTE RIEETGQRLA EYAEKIGVPF EYQGIASKWE TICVEDLNIK KDEVVIVNCL YRFRNLIDET VAIDSPRNRV LNTIRQVNPA IFIHGIVNGS
601: YSVPFFITRF REALFHFSAL FDMLETTVPR DDAQRALIER DLFGREALNV IACEGSDRVE RPETYKQWQV RNLRAGFVQS PLNQDIVLKA KDKVKDIYHK
701: DFVIDEDSEW LLQGWKGRII YAISTWKPNN N
101: EESAALRAAA KPFYDILGHK FPPSPDRQLV AWPLDSPSES STSSYPHSLA SSVTSSNISG AVDSSQRRYV GHSEYRSLSG HSSQPPVGPS SDVRNAMETL
201: EDPLISNGRI PEYLFESFPT WDFRRGVDEA QKFLPGSDKV VIDLEAGGVA KRQEAGKAIS LNVSKAEVLK VKKNRQSEDL DVMEGRNSKQ SAFCSDEPDW
301: IEMFDVLLRQ TEKKATDLRK MMRFEASKNS QVAQPKGPSG TRSRGRKPTK KDVVDLRTLL IHCAQAVAAD DRRTANELLK QIRQHAKPNG DGSQRLAYCF
401: ADGLEARLAG TGSQLYHKLV AKRTTASDML KAYHLYLAAC PFKRLSHFLS NQTILSLTKN ASKVHIIDFG IYFGFQWPCL IRRLFKREGG PPKLRITGID
501: VPQPGFRPTE RIEETGQRLA EYAEKIGVPF EYQGIASKWE TICVEDLNIK KDEVVIVNCL YRFRNLIDET VAIDSPRNRV LNTIRQVNPA IFIHGIVNGS
601: YSVPFFITRF REALFHFSAL FDMLETTVPR DDAQRALIER DLFGREALNV IACEGSDRVE RPETYKQWQV RNLRAGFVQS PLNQDIVLKA KDKVKDIYHK
701: DFVIDEDSEW LLQGWKGRII YAISTWKPNN N
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.