Factsheet for TraesCS5B01G138100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G152700.1	Wheat	cytosol, plastid	98.97	99.22
TraesCS5A01G139000.1	Wheat	cytosol, plastid	98.97	98.97
HORVU5Hr1G045020.29	Barley	cytosol	91.24	89.96
Os03t0690600-03	Rice	cytosol	75.64	80.3
OQU92829	Sorghum	cytosol	75.9	80.25
Zm00001d028603_P001	Maize	cytosol	75.52	79.84
Zm00001d047813_P002	Maize	nucleus	76.8	71.89
Solyc04g011630.1.1	Tomato	cytosol	14.82	67.65
GSMUA_Achr10P...	Banana	nucleus	38.14	66.97
GSMUA_Achr10P...	Banana	cytosol	48.45	62.77
GSMUA_Achr7P15080_001	Banana	cytosol	47.55	61.71
CDX68389	Canola	cytosol	6.19	56.47
VIT_06s0004g04990.t01	Wine grape	cytosol	29.64	52.04
TraesCS1B01G037500.1	Wheat	cytosol	27.32	51.33
PGSC0003DMT400049420	Potato	cytosol	42.65	49.85
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	44.2	48.38
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	19.59	47.95
CDX80265	Canola	endoplasmic reticulum, golgi	19.46	47.63
KRH10240	Soybean	cytosol	36.98	47.36
VIT_13s0019g01810.t01	Wine grape	cytosol	45.36	47.06
VIT_13s0019g01780.t01	Wine grape	nucleus	36.21	46.83
PGSC0003DMT400005480	Potato	cytosol	29.25	46.61
PGSC0003DMT400016258	Potato	cytosol	43.56	46.43
KRH65839	Soybean	cytosol, plastid	42.78	45.48
KRH49113	Soybean	cytosol	42.65	45.1
KRH29773	Soybean	cytosol	35.57	44.95
PGSC0003DMT400022997	Potato	cytosol, plastid	44.07	44.94
Solyc09g010920.1.1	Tomato	cytosol	44.07	44.94
Solyc10g086530.1.1	Tomato	cytosol	44.07	44.94
VIT_13s0019g01710.t01	Wine grape	cytosol	41.75	44.57
KRH24780	Soybean	cytosol	37.89	44.55
KRG99969	Soybean	cytosol	42.27	44.5
TraesCS5B01G494500.1	Wheat	cytosol	37.37	44.14
VIT_13s0019g01700.t01	Wine grape	cytosol	43.17	44.08
CDY71578	Canola	nucleus, plastid	29.38	43.76
KRH23094	Soybean	cytosol	31.19	43.76
KRH29774	Soybean	cytosol	35.44	43.58
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	37.5	43.24
CDY07777	Canola	cytosol, nucleus, peroxisome	37.5	43.24
Solyc05g053090.1.1	Tomato	cytosol	41.37	43.2
CDX79750	Canola	peroxisome	37.5	43.18
VIT_13s0019g01790.t01	Wine grape	cytosol	39.95	43.12
PGSC0003DMT400069949	Potato	cytosol	41.49	43.11
TraesCS4B01G140800.1	Wheat	cytosol	32.6	42.81
KRH29771	Soybean	cytosol	37.5	42.79
KRH23095	Soybean	cytosol	36.21	42.77
KRH24778	Soybean	nucleus	37.11	42.6
PGSC0003DMT400077972	Potato	cytosol	41.24	42.55
KRH29775	Soybean	nucleus	36.86	42.5
TraesCS4B01G336200.1	Wheat	cytosol	31.96	42.47
VIT_06s0004g04980.t01	Wine grape	nucleus	38.4	42.33
KRH24775	Soybean	cytosol	36.98	42.21
Solyc06g076280.1.1	Tomato	cytosol	40.46	41.98
VIT_06s0004g04970.t01	Wine grape	cytosol	35.57	41.95
KRH24773	Soybean	nucleus	37.11	41.92
CDY39530	Canola	cytosol	33.25	41.68
AT2G37650.1	Thale cress	cytosol	38.53	41.64
CDY47877	Canola	nucleus	33.12	41.59
TraesCS4B01G141100.1	Wheat	cytosol	33.63	41.49
Bra028391.1-P	Field mustard	nucleus	32.99	41.29
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	33.51	41.27
VIT_06s0004g04950.t01	Wine grape	cytosol	40.08	41.25
TraesCS4B01G141200.1	Wheat	cytosol	30.03	41.09
TraesCS3B01G392600.1	Wheat	cytosol	43.04	40.98
Bra015584.1-P	Field mustard	cytosol	22.81	40.6
TraesCS4B01G141300.1	Wheat	cytosol	35.18	40.5
CDY47878	Canola	nucleus	35.95	40.38
TraesCS1B01G037300.1	Wheat	cytosol	36.21	39.91
CDX86475	Canola	nucleus	36.47	39.86
Bra028390.1-P	Field mustard	cytosol	36.21	39.8
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	33.12	39.78
KRH29779	Soybean	cytosol	38.02	39.76
KRH10243	Soybean	nucleus	34.02	39.7
AT3G46600.1	Thale cress	cytosol	29.77	39.62
TraesCS4B01G141400.1	Wheat	cytosol	33.63	39.49
AT2G29060.1	Thale cress	cytosol	35.31	39.48
KRH23089	Soybean	cytosol	32.73	39.44
Solyc01g100200.2.1	Tomato	nucleus	33.12	38.59
Solyc06g082530.1.1	Tomato	cytosol	32.35	38.44
CDX77228	Canola	cytosol	33.25	38.39
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	36.73	38.36
TraesCS7B01G077800.1	Wheat	cytosol	36.21	38.23
KRH10241	Soybean	cytosol, nucleus, peroxisome	33.89	38.23
TraesCS7B01G078300.1	Wheat	cytosol	36.34	38.21
Bra033813.1-P	Field mustard	nucleus	28.61	38.14
CDY06266	Canola	cytosol	31.06	38.13
Bra035653.1-P	Field mustard	cytosol	35.44	38.09
CDY31749	Canola	cytosol	35.44	37.88
Bra030688.1-P	Field mustard	nucleus	36.21	37.82
PGSC0003DMT400078286	Potato	nucleus	32.47	37.78
CDY15616	Canola	nucleus	34.79	37.76
TraesCS1B01G037400.1	Wheat	cytosol	35.05	37.62
CDX82987	Canola	nucleus	29.12	37.6
AT5G59450.1	Thale cress	nucleus	29.51	37.54
KRH23090	Soybean	vacuole	29.9	37.36
VIT_06s0004g04960.t01	Wine grape	nucleus	37.89	36.89
TraesCS3B01G081100.1	Wheat	nucleus	33.89	36.78
CDY33040	Canola	nucleus	28.22	36.68
Bra031581.1-P	Field mustard	cytosol	31.57	36.68
TraesCS3B01G081000.1	Wheat	cytosol	34.41	36.68
AT1G07530.1	Thale cress	cytosol	36.34	36.67
AT1G07520.3	Thale cress	cytosol	32.86	36.64
TraesCS3B01G080900.1	Wheat	nucleus	34.02	36.62
CDY06265	Canola	cytosol	31.7	35.65
Bra031580.1-P	Field mustard	cytosol	31.57	35.51
CDY09912	Canola	cytosol	31.96	35.43
TraesCS4B01G141500.1	Wheat	peroxisome	36.47	35.07
TraesCS1B01G037200.1	Wheat	nucleus	33.38	34.21
CDY09911	Canola	nucleus	24.48	32.53
CDX68388	Canola	cytosol	17.27	32.37
TraesCS2B01G217500.1	Wheat	cytosol	18.04	25.27
TraesCS4B01G266700.1	Wheat	cytosol	16.11	23.28
TraesCS3B01G441600.1	Wheat	cytosol	16.37	23.01
TraesCS2B01G239400.1	Wheat	cytosol	16.11	21.93
TraesCS2B01G413500.1	Wheat	cytosol	15.85	19.49

Protein Annotations

EnsemblPlants:TraesCS5B01G138100.1	EnsemblPlantsGene:TraesCS5B01G138100	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF44
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr5B:-:262054867..262057386

Molecular Weight (calculated)

86943.0 Da

IEP (calculated)

7.240

GRAVY (calculated)

-0.478

Length

776 amino acids

Sequence
(BLAST)

001: MTSTPQPPRD LAHAAPPAQD LTGLGLGLAA ARSLRHRPPR QGSMPSGSVE HQTISGSLIH SMIQFCGAPE YFMFNDPQPV IPHHVAAEPS HNAPVATLSR
101: ATNTETDNPE DWEFISDESL NYISRMLMEE DIDEKVSVYQ EESATLRATA KPFYDILGHK FPPSPDRTLT TWSLDSPSES SSSGHAQSLS SVGTSGSIGG
201: AVHSNQCHNV GHSEQLEAYR GLCGRSSQPL VAPSSGVSDA AESLEDPLIT NGRIPEYLFE SLPTWDFRRG VEEAQKFLPG GDKLVIDLEA AGVSKPQEAV
301: KAIPFNVSRT EVLKAKKNRQ SEDLDLIEGR NIKQSAFCSD EPDDWVEMFD DLFRQTEKKA TVLREKMRSE ASKNSQVTQA KGTTGVKTRG RKPTKNDVVD
401: LRTILIHCAQ AVAADDRRTA NELLKQIKQH SKVNGDGSQR LAFCFAQGLE ARLAGTGSQQ YHRLVAKRTT ASDMLKGYHL YFAACPFKRL SHFLSNQTIL
501: SMTKNAKKVH IIDFGIYFGL QWPCLIRRLS KREGGPPILR ITGIDVPEPG FRPTERIEET GQRLAEYAKK FEVPFEYHGI ASKWETIRAE DLKVGKDEVV
601: IVNCLYRFRN LIDETVAVDS PRNRVLNTIR QVNPAIFIHG IVNGSYSVPF FITRFREALF HFSALFDMLE ATVPRDDDQR RLIERDLFGR EALNVIACEG
701: SDRVERPETY KQWQVRNLRA GFVQSPLNQD IVIKAKDKVK DIYHKDFVID EDSGWLLQGW KGRIIYAITT WKHNNS

Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)

001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.