Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035653.1-P | Field mustard | cytosol | 98.62 | 99.17 |
| CDX77228 | Canola | cytosol | 89.67 | 96.88 |
| CDY47878 | Canola | nucleus | 70.66 | 74.24 |
| AT2G29060.1 | Thale cress | cytosol | 70.94 | 74.21 |
| CDY71578 | Canola | nucleus, plastid | 52.34 | 72.94 |
| CDX86475 | Canola | nucleus | 58.68 | 60.0 |
| CDY15616 | Canola | nucleus | 57.85 | 58.74 |
| KRH24780 | Soybean | cytosol | 46.56 | 51.21 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 48.9 | 47.08 |
| GSMUA_Achr10P... | Banana | nucleus | 28.65 | 47.06 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 20.25 | 46.37 |
| KRH29779 | Soybean | cytosol | 46.69 | 45.69 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 23.83 | 44.13 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 47.25 | 43.04 |
| GSMUA_Achr10P... | Banana | cytosol | 35.4 | 42.9 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 24.24 | 42.62 |
| CDX68389 | Canola | cytosol | 4.96 | 42.35 |
| KRH10243 | Soybean | nucleus | 38.57 | 42.11 |
| CDY47877 | Canola | nucleus | 35.67 | 41.91 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 34.44 | 41.81 |
| KRH23090 | Soybean | vacuole | 35.4 | 41.38 |
| CDY39530 | Canola | cytosol | 35.26 | 41.36 |
| KRH23089 | Soybean | cytosol | 36.64 | 41.3 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 25.9 | 41.23 |
| CDX79750 | Canola | peroxisome | 37.74 | 40.65 |
| Zm00001d034664_P001 | Maize | plastid | 31.27 | 40.61 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 37.47 | 40.42 |
| CDY06266 | Canola | cytosol | 35.12 | 40.35 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 35.26 | 40.25 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 33.88 | 40.2 |
| KXG38103 | Sorghum | cytosol | 34.44 | 39.94 |
| OQU92829 | Sorghum | cytosol | 40.36 | 39.92 |
| Zm00001d028603_P001 | Maize | cytosol | 39.67 | 39.24 |
| Os03t0690600-03 | Rice | cytosol | 39.39 | 39.12 |
| KXG21079 | Sorghum | cytosol | 33.06 | 38.52 |
| CDY33040 | Canola | nucleus | 31.41 | 38.19 |
| Zm00001d035671_P001 | Maize | cytosol | 32.64 | 37.86 |
| KXG37250 | Sorghum | cytosol | 33.88 | 37.79 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 33.47 | 37.73 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 34.02 | 37.6 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 34.02 | 37.6 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 33.88 | 37.56 |
| Zm00001d011070_P001 | Maize | cytosol | 32.37 | 37.48 |
| KXG21080 | Sorghum | cytosol | 32.09 | 37.22 |
| CDY06265 | Canola | cytosol | 35.12 | 36.96 |
| CDY09911 | Canola | nucleus | 29.34 | 36.47 |
| CDY09912 | Canola | cytosol | 34.57 | 35.86 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 38.02 | 35.66 |
| CDX82987 | Canola | nucleus | 29.48 | 35.61 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 38.02 | 35.57 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 37.88 | 35.44 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.06 | 35.4 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 38.15 | 35.2 |
| Zm00001d047813_P002 | Maize | nucleus | 39.81 | 34.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.27 | 34.45 |
| CDX68388 | Canola | cytosol | 19.15 | 33.57 |
| EER91260 | Sorghum | nucleus | 32.78 | 33.01 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 31.68 | 32.67 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 30.3 | 32.54 |
| OQU91407 | Sorghum | nucleus | 30.58 | 32.36 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 30.72 | 32.32 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 31.96 | 32.27 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 31.96 | 32.13 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 31.96 | 32.13 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 30.99 | 32.1 |
| CDY07309 | Canola | cytosol | 10.61 | 32.08 |
| KXG38064 | Sorghum | nucleus | 31.68 | 31.94 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 31.68 | 31.9 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 30.99 | 31.87 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 31.13 | 31.7 |
| Zm00001d033166_P001 | Maize | nucleus | 31.96 | 31.69 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 31.13 | 31.56 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 31.41 | 31.28 |
| EES18882 | Sorghum | cytosol | 31.54 | 31.24 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 31.27 | 31.18 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 31.13 | 31.17 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 30.58 | 31.05 |
| OQU91406 | Sorghum | nucleus | 31.96 | 31.02 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 30.85 | 30.98 |
| Zm00001d035670_P001 | Maize | cytosol | 30.72 | 30.72 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 30.44 | 30.65 |
| EES18880 | Sorghum | cytosol | 30.99 | 30.36 |
| CDY00883 | Canola | cytosol | 16.25 | 29.14 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 29.89 | 28.67 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 19.01 | 27.77 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 18.87 | 27.57 |
| CDY71156 | Canola | cytosol, plastid | 14.6 | 27.18 |
| CDY05700 | Canola | cytosol, plastid | 18.46 | 26.96 |
| CDY71174 | Canola | cytosol, plastid | 18.32 | 26.76 |
| CDY00074 | Canola | cytosol, plastid | 18.18 | 26.56 |
| CDY19966 | Canola | cytosol | 18.04 | 26.52 |
| CDY22807 | Canola | nucleus | 15.29 | 26.43 |
| CDY37124 | Canola | nucleus | 15.29 | 26.43 |
| CDY58168 | Canola | plastid | 18.32 | 25.09 |
| CDY42968 | Canola | cytosol | 18.32 | 24.86 |
| CDY35589 | Canola | cytosol | 18.18 | 24.86 |
| CDY50128 | Canola | cytosol, plastid | 18.18 | 24.77 |
| CDY61060 | Canola | cytosol | 17.49 | 23.56 |
| CDY00377 | Canola | cytosol | 17.36 | 22.91 |
| CDY68224 | Canola | cytosol | 17.77 | 22.4 |
| CDY50240 | Canola | cytosol | 17.63 | 22.22 |
| CDY27821 | Canola | cytosol | 13.5 | 22.07 |
| CDY00533 | Canola | cytosol | 13.5 | 21.97 |
| CDY27063 | Canola | cytosol, plastid | 14.74 | 18.58 |
| CDX91655 | Canola | cytosol | 14.05 | 17.35 |
Protein Annotations
| EnsemblPlants:CDY31749 | EnsemblPlantsGene:GSBRNA2T00050394001 | GO:A0A078H2V4 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF132 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY31749 | ProteinID:CDY31749.1 |
| SEG:seg | UniParc:UPI0004EF09D6 | UniProt:A0A078H2V4 | MapMan:15.5.12 | : | : |
Description
BnaA04g16850DBnaA04g16850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2V4]
Coordinates
chrLK032278:+:268928..271108
Molecular Weight (calculated)
82619.5 Da
IEP (calculated)
6.795
GRAVY (calculated)
-0.543
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYSAGFPG SFDNFHYNYK IDFSNFGNGL YLDDQPFLRS PSPFPPLPLP PLHPPPHPEP YSQQNLPPAA AAAEDADADD DCTDSVLQYI SQVLMEEDMD
101: DKPCMFHDAL SLQAAERSLY EALGEKYPDS TRPVQLSHSP DELSDITSSG YTSRTTTTTT TSSDWSFDSL ENSRPSWMQT PIPKNFVFQS TPSTRSSPNS
201: GRNTGIRSSS SNDLVSNMFK DSSWALQFKK GVEEASKFLP KSTQLVIDVE NDHHYVPYRI TGEKYHWRED EHLPEERSKK QAAVYADDPE LSEMFDKILL
301: FGDPKENPKC ILNETSQKEP PKASPSPKGE TTTYPRGQKP TAYVQEIPDL RSLLLSCAQA VSVNDHRRAE GLLRLVRQHS SSYGDGTERL AHYFANSLEA
401: RLAGTGTQVY TALSSKKTSA ADMLKAYQTY VSVCPFKKIG IVFANHTIQQ LVKKTMPDTI HIIDFGISYG FQWHSLVHRL AWRRGSSCKL RITGIDLPQR
501: GFRPANGVIE TGHRLAKYCK KFNVPFEYNA IAQKWETIKL EDLKLKEGEF VAVNSLFRFR NLLDETVAVD SPRDVVLRLI QKIKPNIFIP SILSGSYNAP
601: FFVTRFREVL YHFSSLFDMC DTTLTREDPM RVVFEKEFYG REIMNVVACE GTARVERPES YKQWQGRMMR AGFRQLPVEK ELVQKLRLMV DKEYKSKEFD
701: VDQDGNWFLQ GWKGRLVYAS SFWVSV
101: DKPCMFHDAL SLQAAERSLY EALGEKYPDS TRPVQLSHSP DELSDITSSG YTSRTTTTTT TSSDWSFDSL ENSRPSWMQT PIPKNFVFQS TPSTRSSPNS
201: GRNTGIRSSS SNDLVSNMFK DSSWALQFKK GVEEASKFLP KSTQLVIDVE NDHHYVPYRI TGEKYHWRED EHLPEERSKK QAAVYADDPE LSEMFDKILL
301: FGDPKENPKC ILNETSQKEP PKASPSPKGE TTTYPRGQKP TAYVQEIPDL RSLLLSCAQA VSVNDHRRAE GLLRLVRQHS SSYGDGTERL AHYFANSLEA
401: RLAGTGTQVY TALSSKKTSA ADMLKAYQTY VSVCPFKKIG IVFANHTIQQ LVKKTMPDTI HIIDFGISYG FQWHSLVHRL AWRRGSSCKL RITGIDLPQR
501: GFRPANGVIE TGHRLAKYCK KFNVPFEYNA IAQKWETIKL EDLKLKEGEF VAVNSLFRFR NLLDETVAVD SPRDVVLRLI QKIKPNIFIP SILSGSYNAP
601: FFVTRFREVL YHFSSLFDMC DTTLTREDPM RVVFEKEFYG REIMNVVACE GTARVERPES YKQWQGRMMR AGFRQLPVEK ELVQKLRLMV DKEYKSKEFD
701: VDQDGNWFLQ GWKGRLVYAS SFWVSV
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.