Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr10P... | Banana | nucleus | 63.78 | 56.56 |
CDX68389 | Canola | cytosol | 10.97 | 50.59 |
GSMUA_Achr5P08320_001 | Banana | cytosol | 53.06 | 46.33 |
GSMUA_AchrUn_... | Banana | cytosol | 77.04 | 45.83 |
GSMUA_Achr6P34090_001 | Banana | nucleus | 67.35 | 43.14 |
GSMUA_Achr7P15080_001 | Banana | cytosol | 63.27 | 41.47 |
GSMUA_Achr10P... | Banana | cytosol | 57.65 | 37.73 |
Solyc04g011630.1.1 | Tomato | cytosol | 15.82 | 36.47 |
VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 54.85 | 30.32 |
VIT_06s0004g04990.t01 | Wine grape | cytosol | 34.18 | 30.32 |
PGSC0003DMT400049420 | Potato | cytosol | 51.28 | 30.27 |
TraesCS1B01G037500.1 | Wheat | cytosol | 31.12 | 29.54 |
KRH24780 | Soybean | cytosol | 47.96 | 28.48 |
KXG21080 | Sorghum | cytosol | 44.64 | 27.96 |
KRH65839 | Soybean | cytosol, plastid | 52.04 | 27.95 |
PGSC0003DMT400016258 | Potato | cytosol | 51.53 | 27.75 |
Zm00001d011070_P001 | Maize | cytosol | 44.13 | 27.59 |
KXG38103 | Sorghum | cytosol | 43.88 | 27.48 |
KRH29773 | Soybean | cytosol | 42.6 | 27.2 |
KRG99969 | Soybean | cytosol | 51.02 | 27.14 |
KRH49113 | Soybean | cytosol | 50.77 | 27.11 |
PGSC0003DMT400022997 | Potato | cytosol, plastid | 52.3 | 26.94 |
Solyc09g010920.1.1 | Tomato | cytosol | 52.04 | 26.81 |
KXG21079 | Sorghum | cytosol | 42.6 | 26.81 |
HORVU3Hr1G012520.1 | Barley | cytosol | 31.12 | 26.75 |
Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 45.92 | 26.75 |
CDX79750 | Canola | peroxisome | 45.92 | 26.71 |
CDY07777 | Canola | cytosol, nucleus, peroxisome | 45.66 | 26.6 |
VIT_13s0019g01780.t01 | Wine grape | nucleus | 40.31 | 26.33 |
CDY71578 | Canola | nucleus, plastid | 34.95 | 26.3 |
Solyc10g086530.1.1 | Tomato | cytosol | 51.02 | 26.28 |
PGSC0003DMT400069949 | Potato | cytosol | 49.23 | 25.84 |
Zm00001d035671_P001 | Maize | cytosol | 40.82 | 25.56 |
AT2G37650.1 | Thale cress | cytosol | 46.68 | 25.49 |
PGSC0003DMT400005480 | Potato | cytosol | 31.63 | 25.46 |
VIT_13s0019g01810.t01 | Wine grape | cytosol | 48.47 | 25.4 |
VIT_13s0019g01700.t01 | Wine grape | cytosol | 49.23 | 25.39 |
VIT_13s0019g01790.t01 | Wine grape | cytosol | 46.43 | 25.31 |
Solyc05g053090.1.1 | Tomato | cytosol | 47.96 | 25.3 |
PGSC0003DMT400077972 | Potato | cytosol | 48.47 | 25.27 |
CDY47878 | Canola | nucleus | 44.39 | 25.18 |
Bra028390.1-P | Field mustard | cytosol | 45.15 | 25.07 |
CDX86475 | Canola | nucleus | 45.41 | 25.07 |
Bra015584.1-P | Field mustard | cytosol | 27.81 | 25.0 |
Solyc06g076280.1.1 | Tomato | cytosol | 47.7 | 25.0 |
TraesCS1B01G037300.1 | Wheat | cytosol | 44.9 | 25.0 |
KRH29775 | Soybean | nucleus | 42.86 | 24.96 |
KRH24775 | Soybean | cytosol | 43.11 | 24.85 |
KRH29779 | Soybean | cytosol | 46.94 | 24.8 |
Zm00001d035670_P001 | Maize | cytosol | 45.92 | 24.79 |
VIT_13s0019g01710.t01 | Wine grape | cytosol | 45.92 | 24.76 |
VIT_06s0004g04980.t01 | Wine grape | nucleus | 44.39 | 24.72 |
KRH29771 | Soybean | cytosol | 42.86 | 24.71 |
TraesCS1D01G030800.1 | Wheat | cytosol | 44.13 | 24.68 |
HORVU3Hr1G012550.6 | Barley | cytosol | 37.5 | 24.66 |
KRH10240 | Soybean | cytosol | 38.01 | 24.59 |
VIT_06s0004g04950.t01 | Wine grape | cytosol | 47.19 | 24.54 |
AT2G29060.1 | Thale cress | cytosol | 43.11 | 24.35 |
EES18882 | Sorghum | cytosol | 45.41 | 24.28 |
KRH24773 | Soybean | nucleus | 42.35 | 24.16 |
KRH29774 | Soybean | cytosol | 38.78 | 24.09 |
EES18880 | Sorghum | cytosol | 45.41 | 24.02 |
Bra035653.1-P | Field mustard | cytosol | 44.13 | 23.96 |
TraesCS1A01G030300.1 | Wheat | cytosol | 43.11 | 23.94 |
TraesCS1B01G037400.1 | Wheat | cytosol | 44.13 | 23.93 |
HORVU1Hr1G004440.1 | Barley | cytosol | 43.88 | 23.92 |
CDY31749 | Canola | cytosol | 44.13 | 23.83 |
KRH24778 | Soybean | nucleus | 41.07 | 23.82 |
TraesCS1D01G031000.1 | Wheat | cytosol | 43.88 | 23.72 |
VIT_06s0004g04970.t01 | Wine grape | cytosol | 39.8 | 23.71 |
TraesCS1D01G030900.1 | Wheat | cytosol | 43.11 | 23.7 |
Bra030688.1-P | Field mustard | nucleus | 44.9 | 23.69 |
CDY47877 | Canola | nucleus | 37.24 | 23.62 |
AT1G07530.1 | Thale cress | cytosol | 46.17 | 23.54 |
AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 37.76 | 23.49 |
KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 44.39 | 23.42 |
Bra028391.1-P | Field mustard | nucleus | 36.99 | 23.39 |
KRH23094 | Soybean | cytosol | 32.91 | 23.33 |
CDY39530 | Canola | cytosol | 36.73 | 23.26 |
TraesCS1D01G031200.1 | Wheat | cytosol | 42.86 | 23.05 |
OQU91407 | Sorghum | nucleus | 40.31 | 23.03 |
TraesCS1A01G030200.1 | Wheat | cytosol | 42.35 | 23.02 |
CDY15616 | Canola | nucleus | 41.58 | 22.8 |
KRH10241 | Soybean | cytosol, nucleus, peroxisome | 39.8 | 22.67 |
KRH23095 | Soybean | cytosol | 37.76 | 22.53 |
AT3G46600.1 | Thale cress | cytosol | 33.42 | 22.47 |
KRH10243 | Soybean | nucleus | 37.76 | 22.26 |
Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 17.86 | 22.08 |
CDX80265 | Canola | endoplasmic reticulum, golgi | 17.86 | 22.08 |
KRH23090 | Soybean | vacuole | 34.95 | 22.06 |
CDX77228 | Canola | cytosol | 37.76 | 22.02 |
Zm00001d033166_P001 | Maize | nucleus | 40.82 | 21.86 |
VIT_06s0004g04960.t01 | Wine grape | nucleus | 44.39 | 21.83 |
KRH23089 | Soybean | cytosol | 35.71 | 21.74 |
PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 35.71 | 21.67 |
Solyc06g082530.1.1 | Tomato | cytosol | 35.97 | 21.59 |
TraesCS3D01G067900.1 | Wheat | nucleus | 37.76 | 21.45 |
PGSC0003DMT400078286 | Potato | nucleus | 36.22 | 21.29 |
KXG38064 | Sorghum | nucleus | 38.78 | 21.11 |
EER91260 | Sorghum | nucleus | 38.78 | 21.08 |
Bra033813.1-P | Field mustard | nucleus | 31.12 | 20.96 |
TraesCS3D01G067700.1 | Wheat | cytosol | 38.52 | 20.91 |
TraesCS1B01G037200.1 | Wheat | nucleus | 40.31 | 20.87 |
CDY06266 | Canola | cytosol | 33.42 | 20.73 |
OQU91406 | Sorghum | nucleus | 39.54 | 20.72 |
AT5G59450.1 | Thale cress | nucleus | 32.14 | 20.66 |
CDX82987 | Canola | nucleus | 31.63 | 20.63 |
Solyc01g100200.2.1 | Tomato | nucleus | 34.95 | 20.57 |
TraesCS3B01G081100.1 | Wheat | nucleus | 37.5 | 20.56 |
TraesCS3A01G067900.1 | Wheat | cytosol | 37.76 | 20.5 |
TraesCS3A01G068000.1 | Wheat | nucleus | 37.24 | 20.39 |
TraesCS3B01G080900.1 | Wheat | nucleus | 37.5 | 20.39 |
Bra031581.1-P | Field mustard | cytosol | 34.44 | 20.21 |
CDY09911 | Canola | nucleus | 30.1 | 20.21 |
GSMUA_Achr4P07010_001 | Banana | cytosol | 16.84 | 20.12 |
TraesCS3B01G081000.1 | Wheat | cytosol | 37.24 | 20.05 |
AT1G07520.3 | Thale cress | cytosol | 35.2 | 19.83 |
CDY33040 | Canola | nucleus | 30.1 | 19.77 |
CDY09912 | Canola | cytosol | 33.67 | 18.86 |
TraesCS3D01G067800.1 | Wheat | nucleus | 32.4 | 18.79 |
GSMUA_Achr8P03610_001 | Banana | cytosol | 6.89 | 18.75 |
Bra031580.1-P | Field mustard | cytosol | 32.91 | 18.7 |
CDY06265 | Canola | cytosol | 32.91 | 18.7 |
GSMUA_Achr4P11050_001 | Banana | nucleus | 18.88 | 18.64 |
GSMUA_AchrUn_... | Banana | nucleus | 19.13 | 17.52 |
CDX68388 | Canola | cytosol | 17.86 | 16.91 |
GSMUA_Achr6P11780_001 | Banana | cytosol | 12.76 | 14.62 |
GSMUA_Achr10P... | Banana | cytosol | 18.88 | 13.41 |
GSMUA_Achr6P24310_001 | Banana | cytosol | 18.11 | 13.27 |
GSMUA_Achr9P12070_001 | Banana | mitochondrion, plastid | 16.07 | 12.12 |
GSMUA_Achr3P02410_001 | Banana | nucleus | 17.86 | 11.93 |
GSMUA_Achr1P03650_001 | Banana | mitochondrion | 16.84 | 11.58 |
GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 17.09 | 11.47 |
GSMUA_AchrUn_... | Banana | plastid | 16.33 | 10.94 |
GSMUA_Achr9P24710_001 | Banana | endoplasmic reticulum, plastid | 15.56 | 10.46 |
GSMUA_Achr9P18770_001 | Banana | cytosol | 15.05 | 10.37 |
GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 14.54 | 10.14 |
GSMUA_Achr4P24960_001 | Banana | cytosol | 11.73 | 9.48 |
Protein Annotations
EnsemblPlants:GSMUA_Achr8P02550_001 | EnsemblPlants:GSMUA_Achr8T02550_001 | EnsemblPlantsGene:GSMUA_Achr8G02550_001 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
PANTHER:PTHR31636 | PANTHER:PTHR31636:SF131 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI0002955D5A |
UniProt:M0TM07 | MapMan:15.5.12 | : | : | : | : |
Description
Putative Scarecrow-like protein 33 [Source:GMGC_GENE;Acc:GSMUA_Achr8G02550_001]
Coordinates
chr8:-:1821267..1823231
Molecular Weight (calculated)
44803.9 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.670
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENIDEKFD VYPEDPALIA AEKPFYEILG EKFPPSPDRP PLCSSHFSDS PDDSISNHQG NSWVEESLLS TLTPLDLLTE SQPAWQFQRG LEEARKFLPS
101: EDKLVIDLEA SGFNIPQGMV GVKQEDEDRE HQSVDKLRQK LQNEVSKLSH SCHSKGSSGG KGRGKKQSKR EVVDLRTLLI HCAQAVATDD RRSANELLKQ
201: IRQHSSRHGD ANQRLAHWFA DGLQARLAGT GSQVYQSLVA KRSPVTDILK AYQLYLAACP FKKISHFFST QTILNLRMTG IDWETIRVED LNIREDEVVV
301: VNCLYRFRNL MDETGTERVE RPETYKQWHV RNLRAGFTQL PLKPDIVKKA KDRVKSCYHK DFDMDEDGQW LLQGWKGRII YALSTWKSSS SC
101: EDKLVIDLEA SGFNIPQGMV GVKQEDEDRE HQSVDKLRQK LQNEVSKLSH SCHSKGSSGG KGRGKKQSKR EVVDLRTLLI HCAQAVATDD RRSANELLKQ
201: IRQHSSRHGD ANQRLAHWFA DGLQARLAGT GSQVYQSLVA KRSPVTDILK AYQLYLAACP FKKISHFFST QTILNLRMTG IDWETIRVED LNIREDEVVV
301: VNCLYRFRNL MDETGTERVE RPETYKQWHV RNLRAGFTQL PLKPDIVKKA KDRVKSCYHK DFDMDEDGQW LLQGWKGRII YALSTWKSSS SC
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.