Factsheet for GSMUA_Achr9P18770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P24960_001	Banana	cytosol	61.51	72.16
GSMUA_Achr1P03650_001	Banana	mitochondrion	65.73	65.61
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	60.98	59.42
GSMUA_AchrUn_...	Banana	plastid	59.93	58.29
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	56.06	56.76
GSMUA_Achr8P03610_001	Banana	cytosol	11.6	45.83
CDY27821	Canola	cytosol	35.15	45.05
CDY00533	Canola	cytosol	34.45	43.95
Bra028312.1-P	Field mustard	cytosol	34.62	43.39
Os02t0681900-01	Rice	cytosol	46.05	42.39
Zm00001d002573_P001	Maize	cytosol	45.69	41.73
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	45.69	41.73
Zm00001d051461_P001	Maize	cytosol	44.11	41.35
GSMUA_Achr6P11780_001	Banana	cytosol	24.78	41.23
EES05727	Sorghum	cytosol	45.17	40.86
Os04t0580300-01	Rice	cytosol, nucleus, plastid	44.11	40.55
TraesCS2B01G413500.1	Wheat	cytosol	44.11	39.78
TraesCS2D01G393200.1	Wheat	cytosol	43.76	39.71
TraesCS2A01G395400.1	Wheat	cytosol, mitochondrion, nucleus	43.76	39.46
EES12703	Sorghum	cytosol, nucleus, plastid	44.46	38.8
VIT_16s0050g00950.t01	Wine grape	cytosol, nucleus, plastid	40.07	38.71
HORVU2Hr1G094040.2	Barley	cytosol, plastid	25.66	37.92
CDY27063	Canola	cytosol, plastid	38.31	37.85
Bra022596.1-P	Field mustard	plastid	38.31	37.65
CDX91655	Canola	cytosol	38.14	36.9
KRG91573	Soybean	plastid	37.79	36.2
KRH38397	Soybean	plastid	33.92	35.74
AT5G52510.1	Thale cress	nucleus	39.89	35.47
Solyc06g036170.1.1	Tomato	nucleus	37.08	35.28
PGSC0003DMT400076932	Potato	nucleus	37.26	34.98
KRH35251	Soybean	plastid	36.2	34.92
KRH08880	Soybean	plastid	39.89	34.55
Solyc03g025170.1.1	Tomato	nucleus	38.31	34.55
PGSC0003DMT400026240	Potato	nucleus, plastid	38.49	33.49
GSMUA_Achr10P...	Banana	cytosol	31.11	32.07
GSMUA_Achr4P07010_001	Banana	cytosol	18.45	32.01
GSMUA_Achr3P02410_001	Banana	nucleus	30.93	29.98
GSMUA_Achr4P11050_001	Banana	nucleus	19.33	27.71
GSMUA_Achr6P24310_001	Banana	cytosol	25.48	27.1
GSMUA_AchrUn_...	Banana	nucleus	19.33	25.7
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	20.04	21.92
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	20.39	19.9
GSMUA_Achr5P08320_001	Banana	cytosol	13.71	17.37
GSMUA_Achr10P...	Banana	nucleus	12.3	15.84
GSMUA_Achr8P02550_001	Banana	nucleus	10.37	15.05
GSMUA_Achr6P34090_001	Banana	nucleus	16.17	15.03
GSMUA_Achr10P...	Banana	cytosol	15.64	14.86
GSMUA_Achr7P15080_001	Banana	cytosol	15.29	14.55
GSMUA_AchrUn_...	Banana	cytosol	14.24	12.29

Protein Annotations

EnsemblPlants:GSMUA_Achr9P18770_001	EnsemblPlants:GSMUA_Achr9T18770_001	EnsemblPlantsGene:GSMUA_Achr9G18770_001	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF4	PFAM:PF03514	PFscan:PS50985	SEG:seg	UniParc:UPI000295D6BD
UniProt:M0U1I4	MapMan:15.5.12	:	:	:	:

Description

Putative Scarecrow-like protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr9G18770_001]

Coordinates

chr9:-:14520251..14521960

Molecular Weight (calculated)

60760.8 Da

IEP (calculated)

7.184

GRAVY (calculated)

-0.086

Length

569 amino acids

Sequence
(BLAST)

001: MASGIPGRKL GYEGSGGGGG GGNLFKRTLA DMERQLQNAL LLRSVRQRTQ TMPSIFSFSY GVGGLVCNSF TAAEPQRLVS SLPSASSSEF GLPRKPELLL
101: VSSVPEDRSP VSVSDQLREL ERQLLLDDED EAEASVSCGS AATHAEAIQR LISPPPLLAS PTNSSSSTIS FASCSPPSSM PSPPLPPSSR QMLLDTATAL
201: GEGNLDAATA NLTLLKRAAD TRGDAEHRLM AVMVTALLSR LNHPQVGISH PIADLRSPEH FAATQMLYSL SPCFKLGFVT ANSAILDATK DEPKIHILDF
301: EVGQGGQYAA LIQTVAERLR LRPAKSPPAI RITAIIDPSS PFTNINAGNL RAVGDRIKKL AERFRVVLHF NIVSLRVAEL GAASLGCETG EETLVVNLPF
401: VLSRVPDESV SPENPRDELL RRVCALRPRL VAIAEQEINT STAPFPARLA EACRHYGALL ESLEAAAQDS SGPERGRVEA GLARRAVNAV AGEGAERVER
501: CEVLGKWRAR MSMAGFEPVP LGPTVVESIK ARLASSWPNP GFTVKEDAGS LALGFAWMNR VLTVASAWR

Best Arabidopsis Sequence Match ( AT5G52510.1 )
(BLAST)

001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR

Arabidopsis Description

SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.