Factsheet for HORVU6Hr1G027640.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G069380.3
HORVU5Hr1G018930.2
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944
AT1G79130.1	HORVU4Hr1G069380.3	AT4G33920.1	21798944
AT1G79130.1	HORVU5Hr1G018930.2	AT4G33920.1	21798944
AT3G12830.1	HORVU4Hr1G069380.3	AT4G33920.1	21798944
AT3G12830.1	HORVU5Hr1G018930.2	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G130600.1	Wheat	mitochondrion	64.52	91.74
TraesCS6A01G141200.1	Wheat	mitochondrion	70.97	91.67
TraesCS6B01G169500.1	Wheat	mitochondrion	63.87	84.62
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	34.84	50.47
AT1G56150.1	Thale cress	mitochondrion	32.26	45.45
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	35.48	45.08
GSMUA_Achr9P30660_001	Banana	mitochondrion	36.13	41.48
Solyc07g066560.1.1	Tomato	mitochondrion	32.9	40.48
HORVU7Hr1G107340.1	Barley	mitochondrion	54.84	40.09
Bra001473.1-P	Field mustard	mitochondrion	32.26	39.68
CDX82573	Canola	mitochondrion	32.26	39.68
CDY69352	Canola	mitochondrion	32.26	39.68
PGSC0003DMT400057238	Potato	mitochondrion	32.9	39.53
Bra039345.1-P	Field mustard	mitochondrion	33.55	39.1
CDY43398	Canola	mitochondrion	33.55	39.1
CDY52877	Canola	mitochondrion	32.26	37.88
AT3G12830.1	Thale cress	mitochondrion	32.26	37.88
CDY08400	Canola	mitochondrion	32.26	37.88
Bra034725.1-P	Field mustard	mitochondrion	32.26	37.88
VIT_19s0085g00010.t01	Wine grape	mitochondrion	31.61	37.4
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	32.26	35.97
KRH13714	Soybean	mitochondrion	30.97	34.53
AT1G79130.1	Thale cress	mitochondrion	29.68	34.33
Bra026717.1-P	Field mustard	mitochondrion	31.61	33.56
CDY51000	Canola	mitochondrion	31.61	33.56
CDX81766	Canola	mitochondrion	31.61	33.33
KRH43739	Soybean	mitochondrion	29.68	33.33
GSMUA_Achr4P31990_001	Banana	cytosol	34.19	32.72
Bra026044.1-P	Field mustard	mitochondrion	30.32	32.41
AT1G16510.1	Thale cress	mitochondrion	29.68	31.29
HORVU2Hr1G098310.1	Barley	cytosol	25.16	29.32
GSMUA_Achr6P31530_001	Banana	plastid	29.68	29.3
Bra035094.1-P	Field mustard	mitochondrion	26.45	28.47
CDX87405	Canola	mitochondrion	26.45	28.47
CDY24242	Canola	mitochondrion	36.13	23.14

Protein Annotations

EnsemblPlants:HORVU6Hr1G027640.1	EnsemblPlantsGene:HORVU6Hr1G027640	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	SEG:seg	UniParc:UPI000B470F13	UniProt:A0A287TPC2
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:109594691..109595654

Molecular Weight (calculated)

16347.7 Da

IEP (calculated)

10.249

GRAVY (calculated)

-0.092

Length

155 amino acids

Sequence
(BLAST)

001: PVVLVPVRPL QPTERLDPCA RNPQPFSSLP AAAAPSAMKR LFRRLSRVAA ADSSSAAAAT AYRQLRSAPK QPSAAGGGKV PQGHVPVCVG EEGGPVERFA
101: VRADLLGRPA FAALLLRAAQ EYGYGHPGAL RIPCPVADFR RLLVRLSDDP YAADC

Best Arabidopsis Sequence Match ( AT3G12830.1 )
(BLAST)

001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI

Arabidopsis Description

SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.