Factsheet for PGSC0003DMT400057238

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400013942
PGSC0003DMT400066175

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79130.1	PGSC0003DMT400013942	AT4G33920.1	21798944
AT1G79130.1	PGSC0003DMT400066175	AT4G33920.1	21798944
AT3G12830.1	PGSC0003DMT400013942	AT4G33920.1	21798944
AT3G12830.1	PGSC0003DMT400066175	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g066560.1.1	Tomato	mitochondrion	96.9	99.21
VIT_19s0085g00010.t01	Wine grape	mitochondrion	66.67	65.65
Bra001473.1-P	Field mustard	mitochondrion	62.79	64.29
CDX82573	Canola	mitochondrion	62.79	64.29
CDY69352	Canola	mitochondrion	62.02	63.49
AT3G12830.1	Thale cress	mitochondrion	60.47	59.09
Bra039345.1-P	Field mustard	mitochondrion	58.91	57.14
CDY43398	Canola	mitochondrion	58.91	57.14
KRH43739	Soybean	mitochondrion	60.47	56.52
Bra034725.1-P	Field mustard	mitochondrion	57.36	56.06
CDY52877	Canola	mitochondrion	57.36	56.06
CDY08400	Canola	mitochondrion	57.36	56.06
KRH13714	Soybean	mitochondrion	57.36	53.24
AT1G16510.1	Thale cress	mitochondrion	58.91	51.7
Bra026044.1-P	Field mustard	mitochondrion	56.59	50.34
CDY51000	Canola	mitochondrion	55.81	49.32
Bra026717.1-P	Field mustard	mitochondrion	55.81	49.32
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	46.51	49.18
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	38.76	48.54
TraesCS4A01G297200.1	Wheat	mitochondrion	38.76	48.54
CDX81766	Canola	mitochondrion	54.26	47.62
TraesCS4D01G014900.1	Wheat	mitochondrion	37.21	46.6
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	37.98	45.79
Zm00001d033464_P001	Maize	mitochondrion	36.43	45.63
AT1G79130.1	Thale cress	mitochondrion	47.29	45.52
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	37.98	45.37
TraesCS6D01G130600.1	Wheat	mitochondrion	37.98	44.95
GSMUA_Achr9P30660_001	Banana	mitochondrion	46.51	44.44
CDX87405	Canola	mitochondrion	48.06	43.06
TraesCS6A01G141200.1	Wheat	mitochondrion	39.53	42.5
Zm00001d031146_P001	Maize	mitochondrion	36.43	42.34
TraesCS6B01G169500.1	Wheat	mitochondrion	37.98	41.88
Bra035094.1-P	Field mustard	mitochondrion	46.51	41.67
KXG37892	Sorghum	cytosol, mitochondrion	35.66	40.71
TraesCS7B01G370300.1	Wheat	mitochondrion	43.41	40.29
TraesCS7D01G456400.1	Wheat	mitochondrion	43.41	40.29
TraesCS7B01G370500.1	Wheat	mitochondrion	43.41	40.29
TraesCS7D01G456500.1	Wheat	mitochondrion	43.41	40.29
EES17445	Sorghum	mitochondrion	36.43	40.17
TraesCS7D01G456300.1	Wheat	mitochondrion	41.09	39.85
TraesCS7A01G468900.1	Wheat	mitochondrion	41.09	39.85
TraesCS7B01G370200.1	Wheat	mitochondrion	42.64	39.57
TraesCS7B01G370100.1	Wheat	mitochondrion	42.64	39.57
TraesCS7A01G468600.1	Wheat	mitochondrion	42.64	39.57
TraesCS7D01G456100.1	Wheat	mitochondrion	42.64	39.29
TraesCS3B01G493600.1	Wheat	mitochondrion	28.68	38.95
TraesCS7B01G370400.1	Wheat	mitochondrion	41.86	38.85
OQU76860	Sorghum	mitochondrion	41.86	38.85
Zm00001d036623_P001	Maize	mitochondrion	40.31	38.81
TraesCS7A01G468700.1	Wheat	mitochondrion	34.11	38.6
Os06t0671150-00	Rice	mitochondrion	41.86	38.57
Os12t0626200-01	Rice	mitochondrion	38.76	38.46
OQU84433	Sorghum	mitochondrion, peroxisome	36.43	38.21
Zm00001d046986_P001	Maize	mitochondrion	41.09	38.13
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	41.09	38.13
Zm00001d015354_P001	Maize	mitochondrion	37.21	38.1
Zm00001d053815_P001	Maize	mitochondrion	36.43	37.3
EES12863	Sorghum	mitochondrion	34.88	36.29
Zm00001d010775_P001	Maize	cytosol	22.48	35.37
Zm00001d026308_P001	Maize	mitochondrion	33.33	34.68
TraesCS2D01G415500.1	Wheat	mitochondrion	30.23	33.33
HORVU6Hr1G027640.1	Barley	plastid	39.53	32.9
TraesCS2B01G437000.1	Wheat	mitochondrion	27.13	32.41
GSMUA_Achr4P31990_001	Banana	cytosol	39.53	31.48
CDY24242	Canola	mitochondrion	58.91	31.41
TraesCS7B01G370600.1	Wheat	plastid	44.19	31.15
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	33.33	30.94
GSMUA_Achr6P31530_001	Banana	plastid	37.21	30.57
TraesCS7A01G468500.1	Wheat	plastid	42.64	30.56
TraesCS7D01G456200.1	Wheat	nucleus	42.64	25.94
HORVU7Hr1G107340.1	Barley	mitochondrion	41.86	25.47
Zm00001d010776_P001	Maize	cytosol	21.71	22.58
HORVU2Hr1G098310.1	Barley	cytosol	21.71	21.05

Protein Annotations

EnsemblPlants:PGSC0003DMT400057238	EnsemblPlantsGene:PGSC0003DMG400022233	EntrezGene:102579086	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	PGSC:PGSC0003DMG400022233	RefSeq:XP_006346033.1
SEG:seg	UniParc:UPI00029695FC	UniProt:M1C0P1	MapMan:35.1	:	:

Description

Indole-3-acetic acid-induced protein ARG7 [Source:PGSC_GENE;Acc:PGSC0003DMG400022233]

Coordinates

chr7:+:56587315..56588123

Molecular Weight (calculated)

14654.7 Da

IEP (calculated)

9.100

GRAVY (calculated)

-0.260

Length

129 amino acids

Sequence
(BLAST)

001: MKKLIRRLSR VADSSSNYSL LRSESRSSSR PRRLQSFRTG KLRSGAGVPE GHLPVYVGDE MERFIVSADL LNHPIFVELL NKSAQEYGYE QRGVLRIPCH
101: VLIFERVLEA LRIGDDLQDL LTALSDDLL

Best Arabidopsis Sequence Match ( AT3G12830.1 )
(BLAST)

001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI

Arabidopsis Description

SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.