Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 7
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_03s0091g00470.t01 | |
| VIT_07s0129g00520.t01 | |
| VIT_18s0001g09390.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G79130.1 | VIT_03s0091g00470.t01 | AT4G33920.1 | 21798944 |
| AT1G79130.1 | VIT_07s0129g00520.t01 | AT4G33920.1 | 21798944 |
| AT1G79130.1 | VIT_18s0001g09390.t01 | AT4G33920.1 | 21798944 |
| AT3G12830.1 | VIT_03s0091g00470.t01 | AT4G33920.1 | 21798944 |
| AT3G12830.1 | VIT_07s0129g00520.t01 | AT4G33920.1 | 21798944 |
| AT3G12830.1 | VIT_18s0001g09390.t01 | AT4G33920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g066560.1.1 | Tomato | mitochondrion | 64.89 | 67.46 |
| PGSC0003DMT400057238 | Potato | mitochondrion | 65.65 | 66.67 |
| Bra001473.1-P | Field mustard | mitochondrion | 61.07 | 63.49 |
| CDX82573 | Canola | mitochondrion | 61.07 | 63.49 |
| CDY69352 | Canola | mitochondrion | 60.31 | 62.7 |
| Bra034725.1-P | Field mustard | mitochondrion | 61.83 | 61.36 |
| CDY08400 | Canola | mitochondrion | 61.83 | 61.36 |
| Bra039345.1-P | Field mustard | mitochondrion | 61.83 | 60.9 |
| CDY43398 | Canola | mitochondrion | 61.83 | 60.9 |
| CDY52877 | Canola | mitochondrion | 61.07 | 60.61 |
| AT3G12830.1 | Thale cress | mitochondrion | 59.54 | 59.09 |
| KRH43739 | Soybean | mitochondrion | 61.07 | 57.97 |
| KRH13714 | Soybean | mitochondrion | 60.31 | 56.83 |
| Bra026044.1-P | Field mustard | mitochondrion | 58.78 | 53.1 |
| CDY51000 | Canola | mitochondrion | 58.02 | 52.05 |
| AT1G16510.1 | Thale cress | mitochondrion | 58.02 | 51.7 |
| Bra026717.1-P | Field mustard | mitochondrion | 57.25 | 51.37 |
| CDX81766 | Canola | mitochondrion | 56.49 | 50.34 |
| AT1G79130.1 | Thale cress | mitochondrion | 49.62 | 48.51 |
| GSMUA_Achr6P20050_001 | Banana | cytosol, mitochondrion | 45.04 | 48.36 |
| Zm00001d033464_P001 | Maize | mitochondrion | 37.4 | 47.57 |
| TraesCS4A01G297200.1 | Wheat | mitochondrion | 35.88 | 45.63 |
| GSMUA_Achr9P30660_001 | Banana | mitochondrion | 46.56 | 45.19 |
| Bra035094.1-P | Field mustard | mitochondrion | 49.62 | 45.14 |
| CDX87405 | Canola | mitochondrion | 49.62 | 45.14 |
| TraesCS4A01G297100.1 | Wheat | mitochondrion, plastid | 35.11 | 44.66 |
| TraesCS4D01G014900.1 | Wheat | mitochondrion | 35.11 | 44.66 |
| HORVU4Hr1G002600.1 | Barley | mitochondrion, nucleus | 35.88 | 43.93 |
| TraesCS4B01G016500.1 | Wheat | mitochondrion, plastid | 35.88 | 43.52 |
| EES17445 | Sorghum | mitochondrion | 37.4 | 41.88 |
| KXG37892 | Sorghum | cytosol, mitochondrion | 35.88 | 41.59 |
| Zm00001d031146_P001 | Maize | mitochondrion | 35.11 | 41.44 |
| TraesCS6D01G130600.1 | Wheat | mitochondrion | 34.35 | 41.28 |
| TraesCS6A01G141200.1 | Wheat | mitochondrion | 36.64 | 40.0 |
| OQU84433 | Sorghum | mitochondrion, peroxisome | 36.64 | 39.02 |
| TraesCS7B01G370300.1 | Wheat | mitochondrion | 40.46 | 38.13 |
| Zm00001d015354_P001 | Maize | mitochondrion | 36.64 | 38.1 |
| Zm00001d053815_P001 | Maize | mitochondrion | 36.64 | 38.1 |
| Zm00001d036623_P001 | Maize | mitochondrion | 38.93 | 38.06 |
| TraesCS6B01G169500.1 | Wheat | mitochondrion | 33.59 | 37.61 |
| TraesCS7A01G468900.1 | Wheat | mitochondrion | 38.17 | 37.59 |
| OQU76860 | Sorghum | mitochondrion | 39.69 | 37.41 |
| GSMUA_Achr5P00300_001 | Banana | cytosol, mitochondrion, nucleus | 39.69 | 37.41 |
| TraesCS7A01G468600.1 | Wheat | mitochondrion | 39.69 | 37.41 |
| TraesCS7B01G370500.1 | Wheat | mitochondrion | 39.69 | 37.41 |
| TraesCS7D01G456400.1 | Wheat | mitochondrion | 38.93 | 36.69 |
| Zm00001d046986_P001 | Maize | mitochondrion | 38.93 | 36.69 |
| Os06t0671150-00 | Rice | mitochondrion | 38.93 | 36.43 |
| TraesCS7D01G456300.1 | Wheat | mitochondrion | 36.64 | 36.09 |
| TraesCS7B01G370400.1 | Wheat | mitochondrion | 38.17 | 35.97 |
| TraesCS7B01G370200.1 | Wheat | mitochondrion | 38.17 | 35.97 |
| TraesCS7B01G370100.1 | Wheat | mitochondrion | 38.17 | 35.97 |
| TraesCS7D01G456500.1 | Wheat | mitochondrion | 38.17 | 35.97 |
| TraesCS3B01G493600.1 | Wheat | mitochondrion | 25.95 | 35.79 |
| TraesCS7D01G456100.1 | Wheat | mitochondrion | 38.17 | 35.71 |
| Os12t0626200-01 | Rice | mitochondrion | 35.11 | 35.38 |
| TraesCS7A01G468700.1 | Wheat | mitochondrion | 30.53 | 35.09 |
| TraesCS2D01G415500.1 | Wheat | mitochondrion | 30.53 | 34.19 |
| CDY24242 | Canola | mitochondrion | 61.83 | 33.47 |
| EES12863 | Sorghum | mitochondrion | 31.3 | 33.06 |
| Zm00001d026308_P001 | Maize | mitochondrion | 30.53 | 32.26 |
| Zm00001d010775_P001 | Maize | cytosol | 19.85 | 31.71 |
| HORVU6Hr1G027640.1 | Barley | plastid | 37.4 | 31.61 |
| TraesCS2B01G437000.1 | Wheat | mitochondrion | 25.95 | 31.48 |
| GSMUA_Achr4P31990_001 | Banana | cytosol | 38.17 | 30.86 |
| Os04t0617050-01 | Rice | cytosol, extracellular, mitochondrion | 32.06 | 30.22 |
| GSMUA_Achr6P31530_001 | Banana | plastid | 35.88 | 29.94 |
| TraesCS7B01G370600.1 | Wheat | plastid | 39.69 | 28.42 |
| TraesCS7A01G468500.1 | Wheat | plastid | 38.93 | 28.33 |
| HORVU7Hr1G107340.1 | Barley | mitochondrion | 40.46 | 25.0 |
| TraesCS7D01G456200.1 | Wheat | nucleus | 38.17 | 23.58 |
| HORVU2Hr1G098310.1 | Barley | cytosol | 22.14 | 21.8 |
| Zm00001d010776_P001 | Maize | cytosol | 19.85 | 20.97 |
Protein Annotations
| EntrezGene:100258180 | wikigene:100258180 | MapMan:35.1 | ProteinID:CCB49025 | ProteinID:CCB49025.1 | UniProt:F6H9Y1 |
| EMBL:FN595503 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | EntrezGene:LOC100258180 | wikigene:LOC100258180 |
| PFAM:PF02519 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF37 | InterPro:SAUR_fam | UniParc:UPI0001985BB6 | ArrayExpress:VIT_19s0085g00010 |
| EnsemblPlantsGene:VIT_19s0085g00010 | EnsemblPlants:VIT_19s0085g00010.t01 | unigene:Vvi.22136 | RefSeq:XP_002266248 | RefSeq:XP_002266248.1 | SEG:seg |
Description
No Description!
Coordinates
chr19:+:22279071..22279770
Molecular Weight (calculated)
14947.0 Da
IEP (calculated)
8.867
GRAVY (calculated)
-0.341
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKLIRRLSR VSDSSQYCLL RSDSRSATRT RRSESFRTAK LRRPLSAGGV PHGHLPVYVG EEMERFIVSA EFLNHPVFVN LLNKSAQEYG YEQQGVLRIP
101: CHVLVFERVL EALRLGDESG DLQELVNSEC L
101: CHVLVFERVL EALRLGDESG DLQELVNSEC L
001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI
Arabidopsis Description
SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.