CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
EER95306
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	EER89430	AT4G25200.1	21798944
AT1G56150.1	EER89431	AT4G25200.1	21798944
AT1G56150.1	KXG19616	AT4G25200.1	21798944
AT1G56150.1	OQU75612	AT4G25200.1	21798944
AT1G56150.1	OQU75930	AT4G25200.1	21798944
AT1G56150.1	OQU76071	AT4G25200.1	21798944
AT1G56150.1	OQU85385	AT4G25200.1	21798944
AT1G79130.1	EER95306	AT4G33920.1	21798944
AT3G12830.1	EER95306	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033464_P001	Maize	mitochondrion	76.99	84.47
TraesCS4A01G297200.1	Wheat	mitochondrion	64.6	70.87
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	64.6	70.87
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	67.26	70.37
TraesCS4D01G014900.1	Wheat	mitochondrion	61.95	67.96
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	63.72	67.29
EES17445	Sorghum	mitochondrion	61.95	59.83
OQU84433	Sorghum	mitochondrion, peroxisome	52.21	47.97
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	50.44	46.72
AT1G56150.1	Thale cress	mitochondrion	44.25	45.45
GSMUA_Achr9P30660_001	Banana	mitochondrion	51.33	42.96
OQU76860	Sorghum	mitochondrion	51.33	41.73
EES12863	Sorghum	mitochondrion	45.13	41.13
CDX82573	Canola	mitochondrion	42.48	38.1
Bra001473.1-P	Field mustard	mitochondrion	42.48	38.1
CDY69352	Canola	mitochondrion	42.48	38.1
AT3G12830.1	Thale cress	mitochondrion	43.36	37.12
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	44.25	35.97
VIT_19s0085g00010.t01	Wine grape	mitochondrion	41.59	35.88
Solyc07g066560.1.1	Tomato	mitochondrion	39.82	35.71
PGSC0003DMT400057238	Potato	mitochondrion	40.71	35.66
Bra039345.1-P	Field mustard	mitochondrion	41.59	35.34
CDY43398	Canola	mitochondrion	41.59	35.34
CDY52877	Canola	mitochondrion	40.71	34.85
CDY08400	Canola	mitochondrion	40.71	34.85
Bra034725.1-P	Field mustard	mitochondrion	40.71	34.85
KRH13714	Soybean	mitochondrion	41.59	33.81
AT1G79130.1	Thale cress	mitochondrion	39.82	33.58
KRH43739	Soybean	mitochondrion	40.71	33.33
CDY51000	Canola	mitochondrion	42.48	32.88
Bra026717.1-P	Field mustard	mitochondrion	42.48	32.88
CDX81766	Canola	mitochondrion	42.48	32.65
Bra026044.1-P	Field mustard	mitochondrion	41.59	32.41
AT1G16510.1	Thale cress	mitochondrion	41.59	31.97
GSMUA_Achr6P31530_001	Banana	plastid	44.25	31.85
Bra035094.1-P	Field mustard	mitochondrion	38.94	30.56
CDX87405	Canola	mitochondrion	38.05	29.86
GSMUA_Achr4P31990_001	Banana	cytosol	41.59	29.01
CDY24242	Canola	mitochondrion	41.59	19.42

Protein Annotations

EnsemblPlants:KXG37892	EnsemblPlantsGene:SORBI_3001G146700	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF49	PFAM:PF02519	ProteinID:KXG37892	ProteinID:KXG37892.1	SEG:seg
UniParc:UPI00081AD91B	UniProt:A0A1B6QIZ5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:11791035..11791768

Molecular Weight (calculated)

12144.4 Da

IEP (calculated)

7.733

GRAVY (calculated)

-0.332

Length

113 amino acids

Sequence
(BLAST)

001: MRQLARRLSR VADSSASSPA EEERRGGVNK APRAYAAAAA ETVPEGHVPV HVGEVSDGEV ERFLVRAELL GRPALAHLLG RAALEYGYDH HGPLRIPCSP
101: AAFRRALASL EEP

Best Arabidopsis Sequence Match ( AT1G56150.1 )
(BLAST)

001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT

Arabidopsis Description

SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.