CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
EER95306
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	EER89430	AT4G25200.1	21798944
AT1G56150.1	EER89431	AT4G25200.1	21798944
AT1G56150.1	KXG19616	AT4G25200.1	21798944
AT1G56150.1	OQU75612	AT4G25200.1	21798944
AT1G56150.1	OQU75930	AT4G25200.1	21798944
AT1G56150.1	OQU76071	AT4G25200.1	21798944
AT1G56150.1	OQU85385	AT4G25200.1	21798944
AT1G79130.1	EER95306	AT4G33920.1	21798944
AT3G12830.1	EER95306	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015354_P001	Maize	mitochondrion	71.54	69.84
Zm00001d053815_P001	Maize	mitochondrion	66.67	65.08
TraesCS3B01G493600.1	Wheat	mitochondrion	47.97	62.11
OQU76860	Sorghum	mitochondrion	61.79	54.68
EES17445	Sorghum	mitochondrion	50.41	52.99
KXG37892	Sorghum	cytosol, mitochondrion	47.97	52.21
AT1G56150.1	Thale cress	mitochondrion	41.46	46.36
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	45.53	45.9
EES12863	Sorghum	mitochondrion	45.53	45.16
GSMUA_Achr9P30660_001	Banana	mitochondrion	48.78	44.44
CDX82573	Canola	mitochondrion	41.46	40.48
Bra001473.1-P	Field mustard	mitochondrion	41.46	40.48
CDY69352	Canola	mitochondrion	41.46	40.48
AT3G12830.1	Thale cress	mitochondrion	41.46	38.64
Solyc07g066560.1.1	Tomato	mitochondrion	38.21	37.3
Bra039345.1-P	Field mustard	mitochondrion	39.84	36.84
CDY43398	Canola	mitochondrion	39.84	36.84
VIT_19s0085g00010.t01	Wine grape	mitochondrion	39.02	36.64
PGSC0003DMT400057238	Potato	mitochondrion	38.21	36.43
KRH13714	Soybean	mitochondrion	40.65	35.97
CDY52877	Canola	mitochondrion	38.21	35.61
CDY08400	Canola	mitochondrion	38.21	35.61
Bra034725.1-P	Field mustard	mitochondrion	38.21	35.61
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	39.02	34.53
GSMUA_Achr6P31530_001	Banana	plastid	42.28	33.12
AT1G16510.1	Thale cress	mitochondrion	39.02	32.65
Bra035094.1-P	Field mustard	mitochondrion	38.21	32.64
CDX87405	Canola	mitochondrion	38.21	32.64
KRH43739	Soybean	mitochondrion	36.59	32.61
Bra026044.1-P	Field mustard	mitochondrion	38.21	32.41
Bra026717.1-P	Field mustard	mitochondrion	38.21	32.19
CDY51000	Canola	mitochondrion	38.21	32.19
AT1G79130.1	Thale cress	mitochondrion	34.96	32.09
CDX81766	Canola	mitochondrion	38.21	31.97
GSMUA_Achr4P31990_001	Banana	cytosol	39.02	29.63
CDY24242	Canola	mitochondrion	40.65	20.66

Protein Annotations

EnsemblPlants:OQU84433	EnsemblPlantsGene:SORBI_3004G053400	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	ProteinID:OQU84433	ProteinID:OQU84433.1	SEG:seg
UniParc:UPI000B426B74	UniProt:A0A1Z5RL08	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:4344266..4345292

Molecular Weight (calculated)

13073.0 Da

IEP (calculated)

11.085

GRAVY (calculated)

-0.393

Length

123 amino acids

Sequence
(BLAST)

001: MKRLLRRLSR TVAAAGEDGG GGPAPVARPR RRKGKKKKKA AEGAVPEGHV PVCVGEEGGP VERFAVRAEL LGEPPFAALL RRAAQEYGYA HPGALRIPCP
101: VADFRRLLLR LSHDPSPAAG CHA

Best Arabidopsis Sequence Match ( AT1G56150.1 )
(BLAST)

001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT

Arabidopsis Description

SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.