Factsheet for Bra035094.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034592.1-P
Bra036972.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79130.1	Bra034592.1-P	AT4G33920.1	21798944
AT1G79130.1	Bra036972.1-P	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87405	Canola	mitochondrion	95.83	95.83
AT1G79130.1	Thale cress	mitochondrion	51.39	55.22
Bra001473.1-P	Field mustard	mitochondrion	45.83	52.38
Bra039345.1-P	Field mustard	mitochondrion	47.92	51.88
Bra026044.1-P	Field mustard	mitochondrion	50.69	50.34
VIT_19s0085g00010.t01	Wine grape	mitochondrion	45.14	49.62
Bra026717.1-P	Field mustard	mitochondrion	50.0	49.32
KRH13714	Soybean	mitochondrion	47.22	48.92
Bra034725.1-P	Field mustard	mitochondrion	44.44	48.48
Solyc07g066560.1.1	Tomato	mitochondrion	41.67	47.62
PGSC0003DMT400057238	Potato	mitochondrion	41.67	46.51
KRH43739	Soybean	mitochondrion	44.44	46.38
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	37.5	44.26
Zm00001d033464_P001	Maize	mitochondrion	29.86	41.75
GSMUA_Achr9P30660_001	Banana	mitochondrion	37.5	40.0
TraesCS4A01G297200.1	Wheat	mitochondrion	28.47	39.81
TraesCS4D01G014900.1	Wheat	mitochondrion	28.47	39.81
KXG37892	Sorghum	cytosol, mitochondrion	30.56	38.94
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	29.17	38.89
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	27.78	38.84
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	28.47	38.32
OQU84433	Sorghum	mitochondrion, peroxisome	32.64	38.21
TraesCS6D01G130600.1	Wheat	mitochondrion	27.78	36.7
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	35.42	36.69
Zm00001d015354_P001	Maize	mitochondrion	31.94	36.51
Zm00001d031146_P001	Maize	mitochondrion	27.78	36.04
TraesCS6B01G169500.1	Wheat	mitochondrion	29.17	35.9
Zm00001d036623_P001	Maize	mitochondrion	33.33	35.82
Zm00001d053815_P001	Maize	mitochondrion	31.25	35.71
EES12863	Sorghum	mitochondrion	29.86	34.68
EES17445	Sorghum	mitochondrion	27.78	34.19
TraesCS6A01G141200.1	Wheat	mitochondrion	28.47	34.17
TraesCS7A01G468900.1	Wheat	mitochondrion	31.25	33.83
TraesCS2B01G437000.1	Wheat	mitochondrion	25.0	33.33
Zm00001d010775_P001	Maize	cytosol	18.75	32.93
TraesCS2D01G415500.1	Wheat	mitochondrion	26.39	32.48
TraesCS7D01G456400.1	Wheat	mitochondrion	31.25	32.37
Zm00001d046986_P001	Maize	mitochondrion	31.25	32.37
TraesCS7D01G456500.1	Wheat	mitochondrion	31.25	32.37
TraesCS7B01G370500.1	Wheat	mitochondrion	31.25	32.37
TraesCS7B01G370300.1	Wheat	mitochondrion	31.25	32.37
TraesCS7B01G370100.1	Wheat	mitochondrion	31.25	32.37
TraesCS7B01G370200.1	Wheat	mitochondrion	31.25	32.37
TraesCS7D01G456300.1	Wheat	mitochondrion	29.86	32.33
TraesCS7A01G468600.1	Wheat	mitochondrion	30.56	31.65
TraesCS7B01G370400.1	Wheat	mitochondrion	30.56	31.65
OQU76860	Sorghum	mitochondrion	30.56	31.65
Zm00001d026308_P001	Maize	mitochondrion	27.08	31.45
Os06t0671150-00	Rice	mitochondrion	30.56	31.43
TraesCS7D01G456100.1	Wheat	mitochondrion	30.56	31.43
Os12t0626200-01	Rice	mitochondrion	27.78	30.77
GSMUA_Achr6P31530_001	Banana	plastid	33.33	30.57
TraesCS3B01G493600.1	Wheat	mitochondrion	20.14	30.53
GSMUA_Achr4P31990_001	Banana	cytosol	32.64	29.01
TraesCS7A01G468700.1	Wheat	mitochondrion	22.92	28.95
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	25.69	26.62
HORVU6Hr1G027640.1	Barley	plastid	28.47	26.45
TraesCS7A01G468500.1	Wheat	plastid	31.25	25.0
TraesCS7B01G370600.1	Wheat	plastid	31.25	24.59
Zm00001d010776_P001	Maize	cytosol	18.75	21.77
HORVU7Hr1G107340.1	Barley	mitochondrion	31.25	21.23
TraesCS7D01G456200.1	Wheat	nucleus	30.56	20.75
HORVU2Hr1G098310.1	Barley	cytosol	18.75	20.3

Protein Annotations

EnsemblPlants:Bra035094.1	EnsemblPlants:Bra035094.1-P	EnsemblPlantsGene:Bra035094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374
PANTHER:PTHR31374:SF37	PFAM:PF02519	UniParc:UPI0002541CDE	UniProt:M4F1Z7	MapMan:35.1	:

Description

AT1G79130 (E=3e-042) | auxin-responsive family protein

Coordinates

chrA07:+:22135046..22135480

Molecular Weight (calculated)

15973.0 Da

IEP (calculated)

7.126

GRAVY (calculated)

-0.063

Length

144 amino acids

Sequence
(BLAST)

001: MKSPLRRYSQ VADSSYSHHS FCCNQIFRRD VHHPTSFLVK RATTVASSIP SGLVPVDVGE KMDRFLVSAE LLNHPVFVGL LNRSAQEYGY AQKGVLHIPC
101: NVFVFERVIE ALRSGASQSR DVPELVASLT GDEDVSLWLP GVTE

Best Arabidopsis Sequence Match ( AT1G79130.1 )
(BLAST)

001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE

Arabidopsis Description

SAUR40SAUR40 [Source:UniProtKB/TrEMBL;Acc:A0A178W9C0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.