Factsheet for Zm00001d010776_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044874_P001
Zm00001d048131_P001
Zm00001d052194_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT1G56150.1	Zm00001d052194_P001	AT4G25200.1	21798944
AT1G79130.1	Zm00001d048131_P001	AT4G33920.1	21798944
AT3G12830.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010775_P001	Maize	cytosol	52.42	79.27
TraesCS2B01G437000.1	Wheat	mitochondrion	34.68	39.81
Zm00001d026308_P001	Maize	mitochondrion	39.52	39.52
EES12863	Sorghum	mitochondrion	39.52	39.52
TraesCS2D01G415500.1	Wheat	mitochondrion	35.48	37.61
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	38.71	34.53
Zm00001d053815_P001	Maize	mitochondrion	30.65	30.16
Zm00001d033464_P001	Maize	mitochondrion	25.0	30.1
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	27.42	27.87
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	30.65	27.34
Zm00001d015354_P001	Maize	mitochondrion	27.42	26.98
GSMUA_Achr9P30660_001	Banana	mitochondrion	29.03	26.67
Zm00001d046986_P001	Maize	mitochondrion	29.03	25.9
Zm00001d036623_P001	Maize	mitochondrion	27.42	25.37
Zm00001d031146_P001	Maize	mitochondrion	22.58	25.23
AT1G56150.1	Thale cress	mitochondrion	20.16	22.73
Solyc07g066560.1.1	Tomato	mitochondrion	22.58	22.22
HORVU2Hr1G098310.1	Barley	cytosol	23.39	21.8
PGSC0003DMT400057238	Potato	mitochondrion	22.58	21.71
GSMUA_Achr4P31990_001	Banana	cytosol	28.23	21.6
VIT_19s0085g00010.t01	Wine grape	mitochondrion	20.97	19.85
KRH43739	Soybean	mitochondrion	21.77	19.57
CDX87405	Canola	mitochondrion	21.77	18.75
Bra035094.1-P	Field mustard	mitochondrion	21.77	18.75
KRH13714	Soybean	mitochondrion	20.97	18.7
AT1G79130.1	Thale cress	mitochondrion	20.16	18.66
CDY69352	Canola	mitochondrion	18.55	18.25
Bra026044.1-P	Field mustard	mitochondrion	20.97	17.93
CDX81766	Canola	mitochondrion	20.97	17.69
CDX82573	Canola	mitochondrion	17.74	17.46
Bra001473.1-P	Field mustard	mitochondrion	17.74	17.46
AT3G12830.1	Thale cress	mitochondrion	18.55	17.42
Bra026717.1-P	Field mustard	mitochondrion	20.16	17.12
CDY51000	Canola	mitochondrion	20.16	17.12
Bra039345.1-P	Field mustard	mitochondrion	17.74	16.54
CDY43398	Canola	mitochondrion	17.74	16.54
AT1G16510.1	Thale cress	mitochondrion	19.35	16.33
GSMUA_Achr6P31530_001	Banana	plastid	20.16	15.92
CDY52877	Canola	mitochondrion	16.94	15.91
Bra034725.1-P	Field mustard	mitochondrion	16.94	15.91
CDY08400	Canola	mitochondrion	16.94	15.91
CDY24242	Canola	mitochondrion	17.74	9.09

Protein Annotations

EnsemblPlants:Zm00001d010776_P001	EnsemblPlants:Zm00001d010776_T001	EnsemblPlantsGene:Zm00001d010776	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF38	PFAM:PF02519	ProteinID:AQK94861.1	SEG:seg
UniParc:UPI0008429AF2	UniProt:A0A1D6FTK7	MapMan:35.2	:	:	:

Description

Auxin-responsive protein SAUR71

Coordinates

chr8:+:127492890..127493392

Molecular Weight (calculated)

13720.8 Da

IEP (calculated)

11.503

GRAVY (calculated)

0.076

Length

124 amino acids

Sequence
(BLAST)

001: MVVGAEGEDT QRFIVPVELL GRPPIVELLR RAAQEYTYMR RGSLRIPFPL VAFRLLLSAL AGPPPPPAPT IPFVSSSFSR LGSGSCSTST RLQALQQERP
101: RLGQLQVFLT FSFRRFAVEA AYKA

Best Arabidopsis Sequence Match ( AT1G79130.1 )
(BLAST)

001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE

Arabidopsis Description

SAUR40SAUR40 [Source:UniProtKB/TrEMBL;Acc:A0A178W9C0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.