Factsheet for Zm00001d036623_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044874_P001
Zm00001d048131_P001
Zm00001d052194_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT1G56150.1	Zm00001d052194_P001	AT4G25200.1	21798944
AT1G79130.1	Zm00001d048131_P001	AT4G33920.1	21798944
AT3G12830.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76860	Sorghum	mitochondrion	82.84	79.86
Zm00001d046986_P001	Maize	mitochondrion	79.85	76.98
TraesCS7A01G468900.1	Wheat	mitochondrion	66.42	66.92
Os06t0671150-00	Rice	mitochondrion	68.66	65.71
TraesCS7D01G456300.1	Wheat	mitochondrion	64.18	64.66
TraesCS7B01G370300.1	Wheat	mitochondrion	66.42	64.03
TraesCS7A01G468600.1	Wheat	mitochondrion	65.67	63.31
TraesCS7D01G456500.1	Wheat	mitochondrion	64.93	62.59
TraesCS7D01G456400.1	Wheat	mitochondrion	64.93	62.59
TraesCS7B01G370100.1	Wheat	mitochondrion	64.93	62.59
TraesCS7D01G456100.1	Wheat	mitochondrion	64.93	62.14
TraesCS7B01G370500.1	Wheat	mitochondrion	64.18	61.87
TraesCS7B01G370400.1	Wheat	mitochondrion	63.43	61.15
TraesCS7B01G370200.1	Wheat	mitochondrion	62.69	60.43
Zm00001d015354_P001	Maize	mitochondrion	54.48	57.94
TraesCS7A01G468700.1	Wheat	mitochondrion	47.76	56.14
Zm00001d053815_P001	Maize	mitochondrion	51.49	54.76
Zm00001d033464_P001	Maize	mitochondrion	37.31	48.54
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	44.03	48.36
TraesCS7B01G370600.1	Wheat	plastid	64.93	47.54
TraesCS7A01G468500.1	Wheat	plastid	61.94	46.11
Zm00001d031146_P001	Maize	mitochondrion	38.06	45.95
Zm00001d026308_P001	Maize	mitochondrion	41.79	45.16
AT1G56150.1	Thale cress	mitochondrion	35.82	43.64
Zm00001d010775_P001	Maize	cytosol	26.12	42.68
HORVU7Hr1G107340.1	Barley	mitochondrion	67.16	42.45
GSMUA_Achr9P30660_001	Banana	mitochondrion	42.54	42.22
TraesCS7D01G456200.1	Wheat	nucleus	65.67	41.51
Solyc07g066560.1.1	Tomato	mitochondrion	38.06	40.48
PGSC0003DMT400057238	Potato	mitochondrion	38.81	40.31
CDY69352	Canola	mitochondrion	37.31	39.68
VIT_19s0085g00010.t01	Wine grape	mitochondrion	38.06	38.93
CDX82573	Canola	mitochondrion	36.57	38.89
Bra001473.1-P	Field mustard	mitochondrion	36.57	38.89
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	39.55	38.13
AT3G12830.1	Thale cress	mitochondrion	36.57	37.12
CDY43398	Canola	mitochondrion	36.57	36.84
Bra039345.1-P	Field mustard	mitochondrion	36.57	36.84
CDY08400	Canola	mitochondrion	35.82	36.36
Bra034725.1-P	Field mustard	mitochondrion	35.82	36.36
CDY52877	Canola	mitochondrion	35.82	36.36
KRH13714	Soybean	mitochondrion	35.82	34.53
KRH43739	Soybean	mitochondrion	35.07	34.06
AT1G16510.1	Thale cress	mitochondrion	37.31	34.01
AT1G79130.1	Thale cress	mitochondrion	33.58	33.58
Bra026717.1-P	Field mustard	mitochondrion	36.57	33.56
CDY51000	Canola	mitochondrion	36.57	33.56
Bra035094.1-P	Field mustard	mitochondrion	35.82	33.33
CDX87405	Canola	mitochondrion	35.82	33.33
Bra026044.1-P	Field mustard	mitochondrion	35.82	33.1
CDX81766	Canola	mitochondrion	35.82	32.65
GSMUA_Achr6P31530_001	Banana	plastid	38.06	32.48
GSMUA_Achr4P31990_001	Banana	cytosol	38.81	32.1
Zm00001d010776_P001	Maize	cytosol	25.37	27.42
CDY24242	Canola	mitochondrion	37.31	20.66

Protein Annotations

EMBL:EU951920	EnsemblPlants:Zm00001d036623_P001	EnsemblPlants:Zm00001d036623_T001	EnsemblPlantsGene:Zm00001d036623	EntrezGene:100280474	GO:GO:0008150
GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519
ProteinID:AQK81535.1	SEG:seg	UniParc:UPI000182B4B1	UniProt:B6SGQ5	MapMan:35.2	:

Description

SAUR25-auxin-responsive SAUR family member

Coordinates

chr6:-:95057231..95057635

Molecular Weight (calculated)

13988.9 Da

IEP (calculated)

8.902

GRAVY (calculated)

0.010

Length

134 amino acids

Sequence
(BLAST)

001: MKRLLRRLSR VAAADACACA AAAAYQPLRP GAKAAALSGA RRLGGGARAP GGHVPVCVGE EGGPLERYAV RAELLARPAF AALLRRAAQE YGYARPGALR
101: IPCPVADFRD LLVQLSSTSA DQPDDDAALC CHYC

Best Arabidopsis Sequence Match ( AT1G79130.1 )
(BLAST)

001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE

Arabidopsis Description

SAUR40SAUR40 [Source:UniProtKB/TrEMBL;Acc:A0A178W9C0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.