Factsheet for GSMUA_Achr6P31530_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P21550_001
GSMUA_Achr3P02220_001
GSMUA_Achr4P14220_001
GSMUA_Achr6P11170_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	GSMUA_Achr10P...	AT4G25200.1	21798944
AT1G79130.1	GSMUA_Achr2P21550_001	AT4G33920.1	21798944
AT1G79130.1	GSMUA_Achr3P02220_001	AT4G33920.1	21798944
AT1G79130.1	GSMUA_Achr4P14220_001	AT4G33920.1	21798944
AT1G79130.1	GSMUA_Achr6P11170_001	AT4G33920.1	21798944
AT3G12830.1	GSMUA_Achr2P21550_001	AT4G33920.1	21798944
AT3G12830.1	GSMUA_Achr3P02220_001	AT4G33920.1	21798944
AT3G12830.1	GSMUA_Achr4P14220_001	AT4G33920.1	21798944
AT3G12830.1	GSMUA_Achr6P11170_001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G297200.1	Wheat	mitochondrion	33.12	50.49
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	34.39	50.47
Zm00001d033464_P001	Maize	mitochondrion	32.48	49.51
TraesCS4D01G014900.1	Wheat	mitochondrion	32.48	49.51
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	32.48	49.51
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	31.85	46.3
KXG37892	Sorghum	cytosol, mitochondrion	31.85	44.25
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	33.76	43.44
GSMUA_Achr9P30660_001	Banana	mitochondrion	36.94	42.96
OQU84433	Sorghum	mitochondrion, peroxisome	33.12	42.28
TraesCS6D01G130600.1	Wheat	mitochondrion	28.66	41.28
EES17445	Sorghum	mitochondrion	30.57	41.03
AT1G56150.1	Thale cress	mitochondrion	28.66	40.91
Zm00001d031146_P001	Maize	mitochondrion	28.66	40.54
Os12t0626200-01	Rice	mitochondrion	33.12	40.0
Zm00001d053815_P001	Maize	mitochondrion	31.85	39.68
TraesCS6A01G141200.1	Wheat	mitochondrion	29.94	39.17
TraesCS3B01G493600.1	Wheat	mitochondrion	23.57	38.95
Zm00001d015354_P001	Maize	mitochondrion	31.21	38.89
TraesCS6B01G169500.1	Wheat	mitochondrion	28.66	38.46
Solyc07g066560.1.1	Tomato	mitochondrion	30.57	38.1
CDX82573	Canola	mitochondrion	30.57	38.1
Bra001473.1-P	Field mustard	mitochondrion	30.57	38.1
CDY69352	Canola	mitochondrion	30.57	38.1
Zm00001d036623_P001	Maize	mitochondrion	32.48	38.06
AT3G12830.1	Thale cress	mitochondrion	31.85	37.88
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	33.12	37.41
KRH13714	Soybean	mitochondrion	33.12	37.41
PGSC0003DMT400057238	Potato	mitochondrion	30.57	37.21
Zm00001d046986_P001	Maize	mitochondrion	31.85	35.97
VIT_19s0085g00010.t01	Wine grape	mitochondrion	29.94	35.88
EES12863	Sorghum	mitochondrion	28.03	35.48
TraesCS7A01G468900.1	Wheat	mitochondrion	29.94	35.34
CDY43398	Canola	mitochondrion	29.94	35.34
TraesCS7D01G456300.1	Wheat	mitochondrion	29.94	35.34
Bra039345.1-P	Field mustard	mitochondrion	29.94	35.34
OQU76860	Sorghum	mitochondrion	31.21	35.25
Bra034725.1-P	Field mustard	mitochondrion	29.3	34.85
CDY52877	Canola	mitochondrion	29.3	34.85
CDY08400	Canola	mitochondrion	29.3	34.85
KRH43739	Soybean	mitochondrion	30.57	34.78
TraesCS7B01G370300.1	Wheat	mitochondrion	30.57	34.53
TraesCS7D01G456400.1	Wheat	mitochondrion	30.57	34.53
TraesCS7D01G456500.1	Wheat	mitochondrion	30.57	34.53
GSMUA_Achr4P31990_001	Banana	cytosol	35.03	33.95
TraesCS7B01G370400.1	Wheat	mitochondrion	29.94	33.81
TraesCS7B01G370100.1	Wheat	mitochondrion	29.94	33.81
TraesCS7A01G468600.1	Wheat	mitochondrion	29.94	33.81
TraesCS7D01G456100.1	Wheat	mitochondrion	29.94	33.57
Bra035094.1-P	Field mustard	mitochondrion	30.57	33.33
TraesCS2D01G415500.1	Wheat	mitochondrion	24.84	33.33
TraesCS2B01G437000.1	Wheat	mitochondrion	22.93	33.33
TraesCS7B01G370200.1	Wheat	mitochondrion	29.3	33.09
TraesCS7B01G370500.1	Wheat	mitochondrion	29.3	33.09
Os06t0671150-00	Rice	mitochondrion	29.3	32.86
CDX87405	Canola	mitochondrion	29.94	32.64
Zm00001d026308_P001	Maize	mitochondrion	25.48	32.26
AT1G79130.1	Thale cress	mitochondrion	27.39	32.09
Zm00001d010775_P001	Maize	cytosol	16.56	31.71
AT1G16510.1	Thale cress	mitochondrion	28.66	30.61
Bra026044.1-P	Field mustard	mitochondrion	28.03	30.34
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	26.75	30.22
Bra026717.1-P	Field mustard	mitochondrion	28.03	30.14
CDY51000	Canola	mitochondrion	28.03	30.14
HORVU6Hr1G027640.1	Barley	plastid	29.3	29.68
CDX81766	Canola	mitochondrion	26.75	28.57
TraesCS7A01G468700.1	Wheat	mitochondrion	19.11	26.32
TraesCS7B01G370600.1	Wheat	plastid	29.94	25.68
TraesCS7A01G468500.1	Wheat	plastid	28.66	25.0
HORVU2Hr1G098310.1	Barley	cytosol	21.02	24.81
HORVU7Hr1G107340.1	Barley	mitochondrion	30.57	22.64
TraesCS7D01G456200.1	Wheat	nucleus	29.3	21.7
Zm00001d010776_P001	Maize	cytosol	15.92	20.16
CDY24242	Canola	mitochondrion	30.57	19.83

Protein Annotations

EnsemblPlants:GSMUA_Achr6P31530_001	EnsemblPlants:GSMUA_Achr6T31530_001	EnsemblPlantsGene:GSMUA_Achr6G31530_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0008150
GO:GO:0009719	GO:GO:0009733	GO:GO:0048037	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37
PFAM:PF02519	UniParc:UPI000295B0C3	UniProt:M0TBU8	MapMan:35.1	:	:

Description

Auxin-responsive family protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G31530_001]

Coordinates

chr6:+:31281172..31289330

Molecular Weight (calculated)

18240.9 Da

IEP (calculated)

10.741

GRAVY (calculated)

-0.809

Length

157 amino acids

Sequence
(BLAST)

001: MRQMIRRLAR VADSSSQCES PPRRAGKEQR RRGEGAAAEG HVPVCVGEEM ERFEVRAELL GRPAFAALLR RSAQEYGYEQ RGYTLPHPSH RTRFFSLRDQ
101: VARKRRIVTL KRSIDPQWKA WDCSSSRDVH YSLVRSTCRQ LDLPQLLLMR KGEAEME

Best Arabidopsis Sequence Match ( AT1G56150.1 )
(BLAST)

001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT

Arabidopsis Description

SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.