Factsheet for Os12t0626200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0758000-01
Os03t0207400-01
Os06t0219500-00
Os12t0580900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	Os02t0758000-01	AT4G25200.1	21798944
AT1G56150.1	Os06t0219500-00	AT4G25200.1	21798944
AT1G79130.1	Os03t0207400-01	AT4G33920.1	21798944
AT1G79130.1	Os12t0580900-01	AT4G33920.1	21798944
AT3G12830.1	Os03t0207400-01	AT4G33920.1	21798944
AT3G12830.1	Os12t0580900-01	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031146_P001	Maize	mitochondrion	55.38	64.86
EES17445	Sorghum	mitochondrion	55.38	61.54
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	42.31	45.08
AT1G56150.1	Thale cress	mitochondrion	37.69	44.55
Bra001473.1-P	Field mustard	mitochondrion	39.23	40.48
CDY69352	Canola	mitochondrion	39.23	40.48
CDX82573	Canola	mitochondrion	39.23	40.48
AT3G12830.1	Thale cress	mitochondrion	40.77	40.15
GSMUA_Achr9P30660_001	Banana	mitochondrion	41.54	40.0
Solyc07g066560.1.1	Tomato	mitochondrion	37.69	38.89
PGSC0003DMT400057238	Potato	mitochondrion	38.46	38.76
KRH43739	Soybean	mitochondrion	40.77	38.41
Bra039345.1-P	Field mustard	mitochondrion	39.23	38.35
CDY43398	Canola	mitochondrion	39.23	38.35
CDY08400	Canola	mitochondrion	38.46	37.88
CDY52877	Canola	mitochondrion	38.46	37.88
Bra034725.1-P	Field mustard	mitochondrion	38.46	37.88
Os06t0671150-00	Rice	mitochondrion	39.23	36.43
KRH13714	Soybean	mitochondrion	38.46	35.97
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	38.46	35.97
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	37.69	35.25
VIT_19s0085g00010.t01	Wine grape	mitochondrion	35.38	35.11
AT1G79130.1	Thale cress	mitochondrion	35.38	34.33
GSMUA_Achr6P31530_001	Banana	plastid	40.0	33.12
Bra026044.1-P	Field mustard	mitochondrion	35.38	31.72
AT1G16510.1	Thale cress	mitochondrion	35.38	31.29
CDY51000	Canola	mitochondrion	34.62	30.82
Bra026717.1-P	Field mustard	mitochondrion	34.62	30.82
CDX81766	Canola	mitochondrion	34.62	30.61
GSMUA_Achr4P31990_001	Banana	cytosol	37.69	30.25
CDX87405	Canola	mitochondrion	31.54	28.47
Bra035094.1-P	Field mustard	mitochondrion	30.77	27.78
CDY24242	Canola	mitochondrion	39.23	21.07

Protein Annotations

EnsemblPlants:Os12t0626200-01	EnsemblPlantsGene:Os12g0626200	EntrezGene:4352844	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF49	PFAM:PF02519	ProteinID:ABA99492.1	ProteinID:BAF30342.1
ProteinID:BAT18184.1	ProteinID:EAZ21287.1	RefSeq:XP_015619549.1	SEG:seg	UniParc:UPI0000680BBF	UniProt:Q2QLW2
MapMan:35.2	:	:	:	:	:

Description

SMALL AUXIN-UP RNA 58Auxin responsive SAUR protein family protein. (Os12t0626200-01)

Coordinates

chr12:+:26768220..26768893

Molecular Weight (calculated)

13491.7 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.478

Length

130 amino acids

Sequence
(BLAST)

001: MRQMIRRLSR VGDCSSPSSP PPFSPAPRRG GGGGGSSGKR SSSAAAAHEG VPEGHVPVYV VGEGDGGEAA AAERFVVRAE LLGRPALAEL LRRAAQEYGY
101: DHHGPLRIPC RADVFRAALA AAGDEDDDSE

Best Arabidopsis Sequence Match ( AT1G56150.1 )
(BLAST)

001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT

Arabidopsis Description

SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.