CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91074
KRH28403
KRH35699
KRH77072

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79130.1	KRG91074	AT4G33920.1	21798944
AT1G79130.1	KRH28403	AT4G33920.1	21798944
AT1G79130.1	KRH35699	AT4G33920.1	21798944
AT1G79130.1	KRH77072	AT4G33920.1	21798944
AT3G12830.1	KRG91074	AT4G33920.1	21798944
AT3G12830.1	KRH28403	AT4G33920.1	21798944
AT3G12830.1	KRH35699	AT4G33920.1	21798944
AT3G12830.1	KRH77072	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13714	Soybean	mitochondrion	78.99	78.42
CDX82573	Canola	mitochondrion	57.25	62.7
Bra001473.1-P	Field mustard	mitochondrion	57.25	62.7
CDY69352	Canola	mitochondrion	56.52	61.9
VIT_19s0085g00010.t01	Wine grape	mitochondrion	57.97	61.07
PGSC0003DMT400057238	Potato	mitochondrion	56.52	60.47
Solyc07g066560.1.1	Tomato	mitochondrion	55.07	60.32
AT3G12830.1	Thale cress	mitochondrion	57.25	59.85
Bra039345.1-P	Field mustard	mitochondrion	55.07	57.14
CDY43398	Canola	mitochondrion	55.07	57.14
Bra034725.1-P	Field mustard	mitochondrion	53.62	56.06
CDY08400	Canola	mitochondrion	53.62	56.06
CDY52877	Canola	mitochondrion	52.9	55.3
Bra026044.1-P	Field mustard	mitochondrion	54.35	51.72
Bra026717.1-P	Field mustard	mitochondrion	53.62	50.68
CDY51000	Canola	mitochondrion	53.62	50.68
TraesCS4D01G014900.1	Wheat	mitochondrion	37.68	50.49
AT1G16510.1	Thale cress	mitochondrion	53.62	50.34
CDX81766	Canola	mitochondrion	52.17	48.98
AT1G79130.1	Thale cress	mitochondrion	45.65	47.01
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	41.3	46.72
TraesCS4A01G297200.1	Wheat	mitochondrion	34.06	45.63
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	34.06	45.63
CDX87405	Canola	mitochondrion	46.38	44.44
Bra035094.1-P	Field mustard	mitochondrion	46.38	44.44
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	34.78	44.44
Zm00001d033464_P001	Maize	mitochondrion	32.61	43.69
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	33.33	42.99
GSMUA_Achr9P30660_001	Banana	mitochondrion	41.3	42.22
Zm00001d031146_P001	Maize	mitochondrion	33.33	41.44
Os12t0626200-01	Rice	mitochondrion	38.41	40.77
KXG37892	Sorghum	cytosol, mitochondrion	33.33	40.71
TraesCS6D01G130600.1	Wheat	mitochondrion	31.88	40.37
Zm00001d046986_P001	Maize	mitochondrion	39.86	39.57
TraesCS6A01G141200.1	Wheat	mitochondrion	34.06	39.17
TraesCS7A01G468900.1	Wheat	mitochondrion	37.68	39.1
TraesCS7D01G456400.1	Wheat	mitochondrion	39.13	38.85
EES17445	Sorghum	mitochondrion	32.61	38.46
TraesCS7B01G370500.1	Wheat	mitochondrion	38.41	38.13
TraesCS7B01G370300.1	Wheat	mitochondrion	38.41	38.13
TraesCS7B01G370200.1	Wheat	mitochondrion	38.41	38.13
TraesCS7A01G468600.1	Wheat	mitochondrion	38.41	38.13
TraesCS7D01G456500.1	Wheat	mitochondrion	38.41	38.13
TraesCS6B01G169500.1	Wheat	mitochondrion	31.88	37.61
TraesCS7D01G456300.1	Wheat	mitochondrion	36.23	37.59
TraesCS7B01G370100.1	Wheat	mitochondrion	37.68	37.41
Zm00001d015354_P001	Maize	mitochondrion	34.06	37.3
Zm00001d053815_P001	Maize	mitochondrion	34.06	37.3
TraesCS7D01G456100.1	Wheat	mitochondrion	37.68	37.14
Os06t0671150-00	Rice	mitochondrion	37.68	37.14
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	36.96	36.69
TraesCS7B01G370400.1	Wheat	mitochondrion	36.96	36.69
OQU84433	Sorghum	mitochondrion, peroxisome	32.61	36.59
OQU76860	Sorghum	mitochondrion	36.23	35.97
TraesCS7A01G468700.1	Wheat	mitochondrion	29.71	35.96
TraesCS3B01G493600.1	Wheat	mitochondrion	24.64	35.79
EES12863	Sorghum	mitochondrion	31.88	35.48
Zm00001d036623_P001	Maize	mitochondrion	34.06	35.07
Zm00001d026308_P001	Maize	mitochondrion	29.71	33.06
TraesCS2D01G415500.1	Wheat	mitochondrion	26.81	31.62
CDY24242	Canola	mitochondrion	55.07	31.41
GSMUA_Achr6P31530_001	Banana	plastid	34.78	30.57
TraesCS2B01G437000.1	Wheat	mitochondrion	23.91	30.56
Zm00001d010775_P001	Maize	cytosol	18.12	30.49
GSMUA_Achr4P31990_001	Banana	cytosol	35.51	30.25
HORVU6Hr1G027640.1	Barley	plastid	33.33	29.68
TraesCS7B01G370600.1	Wheat	plastid	39.13	29.51
TraesCS7A01G468500.1	Wheat	plastid	36.96	28.33
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	28.26	28.06
HORVU7Hr1G107340.1	Barley	mitochondrion	37.68	24.53
TraesCS7D01G456200.1	Wheat	nucleus	36.23	23.58
Zm00001d010776_P001	Maize	cytosol	19.57	21.77
HORVU2Hr1G098310.1	Barley	cytosol	19.57	20.3

Protein Annotations

EMBL:ACUP02004889	EnsemblPlants:KRH43739	EnsemblPlantsGene:GLYMA_08G168300	EntrezGene:100806044	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	ProteinID:KRH43739
ProteinID:KRH43739.1	UniParc:UPI0001876197	UniProt:I1KU04	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:-:13332470..13332886

Molecular Weight (calculated)

15760.0 Da

IEP (calculated)

8.867

GRAVY (calculated)

-0.242

Length

138 amino acids

Sequence
(BLAST)

001: MKQLIRRLSR VADSSNYTLL RSDSSQACHH RRPRAESFRL SAPSKIRRSS AAVVPEGHVP IYVGDEMERF VVCAELLNHP VFVKLLNESA QEYGYEQKGV
101: LRLPCRVFVF ERVLDALRLG LNARDIAELV NFSPEEFS

Best Arabidopsis Sequence Match ( AT3G12830.1 )
(BLAST)

001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI

Arabidopsis Description

SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.