Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d044874_P001 | |
| Zm00001d048131_P001 | |
| Zm00001d052194_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37892 | Sorghum | cytosol, mitochondrion | 84.47 | 76.99 |
| TraesCS4A01G297200.1 | Wheat | mitochondrion | 73.79 | 73.79 |
| TraesCS4A01G297100.1 | Wheat | mitochondrion, plastid | 70.87 | 70.87 |
| TraesCS4B01G016500.1 | Wheat | mitochondrion, plastid | 73.79 | 70.37 |
| TraesCS4D01G014900.1 | Wheat | mitochondrion | 69.9 | 69.9 |
| HORVU4Hr1G002600.1 | Barley | mitochondrion, nucleus | 71.84 | 69.16 |
| Zm00001d031146_P001 | Maize | mitochondrion | 65.05 | 60.36 |
| GSMUA_Achr6P20050_001 | Banana | cytosol, mitochondrion | 53.4 | 45.08 |
| AT1G56150.1 | Thale cress | mitochondrion | 47.57 | 44.55 |
| Zm00001d053815_P001 | Maize | mitochondrion | 52.43 | 42.86 |
| Zm00001d015354_P001 | Maize | mitochondrion | 52.43 | 42.86 |
| Zm00001d026308_P001 | Maize | mitochondrion | 49.51 | 41.13 |
| GSMUA_Achr9P30660_001 | Banana | mitochondrion | 53.4 | 40.74 |
| Zm00001d046986_P001 | Maize | mitochondrion | 54.37 | 40.29 |
| Zm00001d010775_P001 | Maize | cytosol | 30.1 | 37.8 |
| VIT_19s0085g00010.t01 | Wine grape | mitochondrion | 47.57 | 37.4 |
| Zm00001d036623_P001 | Maize | mitochondrion | 48.54 | 37.31 |
| Solyc07g066560.1.1 | Tomato | mitochondrion | 45.63 | 37.3 |
| GSMUA_Achr5P00300_001 | Banana | cytosol, mitochondrion, nucleus | 49.51 | 36.69 |
| CDX82573 | Canola | mitochondrion | 44.66 | 36.51 |
| Bra001473.1-P | Field mustard | mitochondrion | 44.66 | 36.51 |
| CDY69352 | Canola | mitochondrion | 44.66 | 36.51 |
| PGSC0003DMT400057238 | Potato | mitochondrion | 45.63 | 36.43 |
| AT3G12830.1 | Thale cress | mitochondrion | 45.63 | 35.61 |
| CDY52877 | Canola | mitochondrion | 44.66 | 34.85 |
| Bra034725.1-P | Field mustard | mitochondrion | 44.66 | 34.85 |
| CDY08400 | Canola | mitochondrion | 44.66 | 34.85 |
| Bra039345.1-P | Field mustard | mitochondrion | 44.66 | 34.59 |
| CDY43398 | Canola | mitochondrion | 44.66 | 34.59 |
| KRH13714 | Soybean | mitochondrion | 46.6 | 34.53 |
| Bra026717.1-P | Field mustard | mitochondrion | 46.6 | 32.88 |
| CDY51000 | Canola | mitochondrion | 46.6 | 32.88 |
| AT1G79130.1 | Thale cress | mitochondrion | 42.72 | 32.84 |
| CDX81766 | Canola | mitochondrion | 46.6 | 32.65 |
| KRH43739 | Soybean | mitochondrion | 43.69 | 32.61 |
| GSMUA_Achr6P31530_001 | Banana | plastid | 49.51 | 32.48 |
| GSMUA_Achr4P31990_001 | Banana | cytosol | 49.51 | 31.48 |
| AT1G16510.1 | Thale cress | mitochondrion | 44.66 | 31.29 |
| Bra026044.1-P | Field mustard | mitochondrion | 43.69 | 31.03 |
| Bra035094.1-P | Field mustard | mitochondrion | 41.75 | 29.86 |
| CDX87405 | Canola | mitochondrion | 39.81 | 28.47 |
| Zm00001d010776_P001 | Maize | cytosol | 30.1 | 25.0 |
| CDY24242 | Canola | mitochondrion | 44.66 | 19.01 |
Protein Annotations
| EMBL:EU955231 | EnsemblPlants:Zm00001d033464_P001 | EnsemblPlants:Zm00001d033464_T001 | EnsemblPlantsGene:Zm00001d033464 | EntrezGene:100281007 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF49 | PFAM:PF02519 |
| ProteinID:AAT42186.1 | ProteinID:ONM07645.1 | UniParc:UPI00003B043A | UniProt:Q6JAC9 | MapMan:35.1 | : |
Description
Putative auxin-induced protein family%3B SAUR14-auxin-responsive SAUR family member
Coordinates
chr1:+:263441814..263442125
Molecular Weight (calculated)
11097.3 Da
IEP (calculated)
10.002
GRAVY (calculated)
-0.399
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQLARRLTR VADSSASPAE ERRGVEKAPQ AAAVPEGHVP VHVGERSDGE AERFLVRAEL LGRPALAHLL GRAAQEYGYG HQGPLRIPCS PAAFRRALAA
101: LEP
101: LEP
001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT
101: LRLGLADRVT
Arabidopsis Description
SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.