Factsheet for Zm00001d015354_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044874_P001
Zm00001d048131_P001
Zm00001d052194_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT1G56150.1	Zm00001d052194_P001	AT4G25200.1	21798944
AT1G79130.1	Zm00001d048131_P001	AT4G33920.1	21798944
AT3G12830.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053815_P001	Maize	mitochondrion	74.6	74.6
OQU84433	Sorghum	mitochondrion, peroxisome	69.84	71.54
TraesCS3B01G493600.1	Wheat	mitochondrion	46.03	61.05
Zm00001d046986_P001	Maize	mitochondrion	61.9	56.12
Zm00001d036623_P001	Maize	mitochondrion	57.94	54.48
Zm00001d033464_P001	Maize	mitochondrion	42.86	52.43
Zm00001d031146_P001	Maize	mitochondrion	43.65	49.55
Zm00001d026308_P001	Maize	mitochondrion	46.03	46.77
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	42.86	44.26
GSMUA_Achr9P30660_001	Banana	mitochondrion	46.83	43.7
AT1G56150.1	Thale cress	mitochondrion	37.3	42.73
Zm00001d010775_P001	Maize	cytosol	27.78	42.68
CDX82573	Canola	mitochondrion	41.27	41.27
Bra001473.1-P	Field mustard	mitochondrion	41.27	41.27
CDY69352	Canola	mitochondrion	41.27	41.27
AT3G12830.1	Thale cress	mitochondrion	40.48	38.64
Solyc07g066560.1.1	Tomato	mitochondrion	38.1	38.1
PGSC0003DMT400057238	Potato	mitochondrion	38.1	37.21
VIT_19s0085g00010.t01	Wine grape	mitochondrion	38.1	36.64
CDY52877	Canola	mitochondrion	38.1	36.36
CDY08400	Canola	mitochondrion	38.1	36.36
Bra034725.1-P	Field mustard	mitochondrion	38.1	36.36
CDY43398	Canola	mitochondrion	38.1	36.09
Bra039345.1-P	Field mustard	mitochondrion	38.1	36.09
AT1G79130.1	Thale cress	mitochondrion	37.3	35.07
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	38.1	34.53
KRH13714	Soybean	mitochondrion	38.1	34.53
KRH43739	Soybean	mitochondrion	37.3	34.06
CDX87405	Canola	mitochondrion	38.1	33.33
AT1G16510.1	Thale cress	mitochondrion	38.1	32.65
Bra035094.1-P	Field mustard	mitochondrion	36.51	31.94
Bra026044.1-P	Field mustard	mitochondrion	36.51	31.72
GSMUA_Achr6P31530_001	Banana	plastid	38.89	31.21
Bra026717.1-P	Field mustard	mitochondrion	35.71	30.82
CDY51000	Canola	mitochondrion	35.71	30.82
CDX81766	Canola	mitochondrion	35.71	30.61
GSMUA_Achr4P31990_001	Banana	cytosol	35.71	27.78
Zm00001d010776_P001	Maize	cytosol	26.98	27.42
CDY24242	Canola	mitochondrion	38.89	20.25

Protein Annotations

EnsemblPlants:Zm00001d015354_P001	EnsemblPlants:Zm00001d015354_T001	EnsemblPlantsGene:Zm00001d015354	EntrezGene:103626666	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	ProteinID:AQK68714.1
SEG:seg	UniParc:UPI000221C7EC	UniProt:A0A1D6H1F8	MapMan:35.2	:	:

Description

Auxin-responsive protein SAUR71

Coordinates

chr5:+:85946140..85946524

Molecular Weight (calculated)

13575.4 Da

IEP (calculated)

11.303

GRAVY (calculated)

-0.420

Length

126 amino acids

Sequence
(BLAST)

001: MKRLLRRLSR TVVAAAASSE DGGAAARPSS KDDGSRRRRR KKAGSVPEGH VPVCVGEEGG PVERFAVRAE LLGEPPFAAL LRRAAQEYGY AHPGALRIPC
101: PVADFRRLLL RLSRDPAPAA GRYAYA

Best Arabidopsis Sequence Match ( AT3G12830.1 )
(BLAST)

001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI

Arabidopsis Description

SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.