Factsheet for Zm00001d026308_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044874_P001
Zm00001d048131_P001
Zm00001d052194_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT1G56150.1	Zm00001d052194_P001	AT4G25200.1	21798944
AT1G79130.1	Zm00001d048131_P001	AT4G33920.1	21798944
AT3G12830.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12863	Sorghum	mitochondrion	86.29	86.29
TraesCS2D01G415500.1	Wheat	mitochondrion	71.77	76.07
Zm00001d010775_P001	Maize	cytosol	45.97	69.51
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	74.19	66.19
TraesCS2B01G437000.1	Wheat	mitochondrion	56.45	64.81
Zm00001d033464_P001	Maize	mitochondrion	41.13	49.51
Zm00001d053815_P001	Maize	mitochondrion	46.77	46.03
Zm00001d015354_P001	Maize	mitochondrion	46.77	46.03
Zm00001d031146_P001	Maize	mitochondrion	41.13	45.95
Zm00001d036623_P001	Maize	mitochondrion	45.16	41.79
Zm00001d046986_P001	Maize	mitochondrion	45.97	41.01
Zm00001d010776_P001	Maize	cytosol	39.52	39.52
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	36.29	36.89
AT1G56150.1	Thale cress	mitochondrion	32.26	36.36
GSMUA_Achr9P30660_001	Banana	mitochondrion	37.9	34.81
Bra001473.1-P	Field mustard	mitochondrion	34.68	34.13
Solyc07g066560.1.1	Tomato	mitochondrion	34.68	34.13
CDX82573	Canola	mitochondrion	34.68	34.13
HORVU2Hr1G098310.1	Barley	cytosol	36.29	33.83
CDY69352	Canola	mitochondrion	33.87	33.33
PGSC0003DMT400057238	Potato	mitochondrion	34.68	33.33
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	37.1	33.09
AT1G79130.1	Thale cress	mitochondrion	33.87	31.34
AT3G12830.1	Thale cress	mitochondrion	33.06	31.06
KRH13714	Soybean	mitochondrion	34.68	30.94
CDY43398	Canola	mitochondrion	33.06	30.83
Bra039345.1-P	Field mustard	mitochondrion	33.06	30.83
VIT_19s0085g00010.t01	Wine grape	mitochondrion	32.26	30.53
KRH43739	Soybean	mitochondrion	33.06	29.71
CDY08400	Canola	mitochondrion	31.45	29.55
Bra034725.1-P	Field mustard	mitochondrion	31.45	29.55
CDY52877	Canola	mitochondrion	31.45	29.55
AT1G16510.1	Thale cress	mitochondrion	34.68	29.25
CDY51000	Canola	mitochondrion	33.87	28.77
Bra026717.1-P	Field mustard	mitochondrion	33.06	28.08
CDX81766	Canola	mitochondrion	33.06	27.89
CDX87405	Canola	mitochondrion	31.45	27.08
Bra035094.1-P	Field mustard	mitochondrion	31.45	27.08
Bra026044.1-P	Field mustard	mitochondrion	30.65	26.21
GSMUA_Achr4P31990_001	Banana	cytosol	33.87	25.93
GSMUA_Achr6P31530_001	Banana	plastid	32.26	25.48
CDY24242	Canola	mitochondrion	33.06	16.94

Protein Annotations

EnsemblPlants:Zm00001d026308_P001	EnsemblPlants:Zm00001d026308_T001	EnsemblPlantsGene:Zm00001d026308	EntrezGene:103642058	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF38	PFAM:PF02519	ProteinID:AQK46211.1
SEG:seg	UniParc:UPI000182CEAC	UniProt:K7U6Q8	MapMan:35.2	:	:

Description

Auxin-responsive protein SAUR71

Coordinates

chr10:-:143309469..143309843

Molecular Weight (calculated)

12496.3 Da

IEP (calculated)

8.499

GRAVY (calculated)

0.328

Length

124 amino acids

Sequence
(BLAST)

001: MTMRGLLRCV STGACRVAPG AVAEPVPASP GATGGKVPAG HVPVEVGAEG EETQRFVVPA ELLGRPPIAE LLRHAAQEYG YARRGPLRIP CPVAAFRLLL
101: GALAGSGAGG PDGALTLAYF AVAV

Best Arabidopsis Sequence Match ( AT1G79130.1 )
(BLAST)

001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE

Arabidopsis Description

SAUR40SAUR40 [Source:UniProtKB/TrEMBL;Acc:A0A178W9C0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.