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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU4Hr1G069380.3
HORVU5Hr1G018930.2
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G56150.1 HORVU6Hr1G077710.3 AT4G25200.1 21798944
AT1G56150.1 HORVU7Hr1G036470.3 AT4G25200.1 21798944
AT1G56150.1 HORVU7Hr1G036500.7 AT4G25200.1 21798944
AT1G56150.1 HORVU7Hr1G036540.3 AT4G25200.1 21798944
AT1G56150.1 HORVU7Hr1G036570.2 AT4G25200.1 21798944
AT1G79130.1 HORVU4Hr1G069380.3 AT4G33920.1 21798944
AT1G79130.1 HORVU5Hr1G018930.2 AT4G33920.1 21798944
AT3G12830.1 HORVU4Hr1G069380.3 AT4G33920.1 21798944
AT3G12830.1 HORVU5Hr1G018930.2 AT4G33920.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G415500.1 Wheat mitochondrion 42.86 48.72
EES12863 Sorghum mitochondrion 38.35 41.13
TraesCS2B01G437000.1 Wheat mitochondrion 32.33 39.81
Zm00001d026308_P001 Maize mitochondrion 33.83 36.29
Os04t0617050-01 Rice cytosol, extracellular, mitochondrion 37.59 35.97
Zm00001d010775_P001 Maize cytosol 21.8 35.37
HORVU4Hr1G002600.1 Barley mitochondrion, nucleus 27.07 33.64
GSMUA_Achr6P20050_001 Banana cytosol, mitochondrion 25.56 27.87
GSMUA_Achr9P30660_001 Banana mitochondrion 27.82 27.41
HORVU6Hr1G027640.1 Barley plastid 29.32 25.16
AT1G56150.1 Thale cress mitochondrion 20.3 24.55
AT3G12830.1 Thale cress mitochondrion 23.31 23.48
Zm00001d010776_P001 Maize cytosol 21.8 23.39
GSMUA_Achr5P00300_001 Banana cytosol, mitochondrion, nucleus 24.06 23.02
Bra001473.1-P Field mustard mitochondrion 21.8 23.02
CDX82573 Canola mitochondrion 21.8 23.02
CDY08400 Canola mitochondrion 22.56 22.73
CDY52877 Canola mitochondrion 22.56 22.73
Bra034725.1-P Field mustard mitochondrion 22.56 22.73
CDY43398 Canola mitochondrion 22.56 22.56
Bra039345.1-P Field mustard mitochondrion 22.56 22.56
AT1G16510.1 Thale cress mitochondrion 24.81 22.45
CDY69352 Canola mitochondrion 21.05 22.22
Solyc07g066560.1.1 Tomato mitochondrion 21.05 22.22
VIT_19s0085g00010.t01 Wine grape mitochondrion 21.8 22.14
CDY51000 Canola mitochondrion 24.06 21.92
Bra026717.1-P Field mustard mitochondrion 24.06 21.92
PGSC0003DMT400057238 Potato mitochondrion 21.05 21.71
AT1G79130.1 Thale cress mitochondrion 21.8 21.64
Bra026044.1-P Field mustard mitochondrion 23.31 21.38
CDX81766 Canola mitochondrion 23.31 21.09
GSMUA_Achr6P31530_001 Banana plastid 24.81 21.02
KRH13714 Soybean mitochondrion 21.8 20.86
KRH43739 Soybean mitochondrion 20.3 19.57
GSMUA_Achr4P31990_001 Banana cytosol 23.31 19.14
CDX87405 Canola mitochondrion 20.3 18.75
Bra035094.1-P Field mustard mitochondrion 20.3 18.75
HORVU7Hr1G107340.1 Barley mitochondrion 28.57 17.92
CDY24242 Canola mitochondrion 22.56 12.4
Protein Annotations
EnsemblPlants:HORVU2Hr1G098310.1EnsemblPlantsGene:HORVU2Hr1G098310GO:GO:0008150GO:GO:0009719GO:GO:0009733InterPro:SAUR_fam
PANTHER:PTHR31374PANTHER:PTHR31374:SF38PFAM:PF02519SEG:segUniParc:UPI000B478180UniProt:A0A287J3N8
MapMan:35.2:::::
Description
No Description!
Coordinates
chrchr2H:+:682412398..682412798
Molecular Weight (calculated)
10263.3 Da
IEP (calculated)
7.583
GRAVY (calculated)
-0.191
Length
133 amino acids
Sequence
(BLAST)
001: VEGKGRAGSR EGRMKKGGLL RCVSTGACRV APGAVAEMAI SPSASGKVPA GHVPVEVGAE GEETERFLVP AELLGRPPIA ELLRRAAQEY GXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXLVDGH HHD
Best Arabidopsis Sequence Match ( AT1G79130.1 )
(BLAST)
001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE
Arabidopsis Description
SAUR40SAUR40 [Source:UniProtKB/TrEMBL;Acc:A0A178W9C0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.