Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P20050_001 | Banana | cytosol, mitochondrion | 40.12 | 53.28 |
| GSMUA_Achr9P30660_001 | Banana | mitochondrion | 41.36 | 49.63 |
| Zm00001d033464_P001 | Maize | mitochondrion | 31.48 | 49.51 |
| TraesCS4A01G297100.1 | Wheat | mitochondrion, plastid | 30.86 | 48.54 |
| HORVU4Hr1G002600.1 | Barley | mitochondrion, nucleus | 31.48 | 47.66 |
| TraesCS4A01G297200.1 | Wheat | mitochondrion | 30.25 | 47.57 |
| TraesCS4D01G014900.1 | Wheat | mitochondrion | 29.63 | 46.6 |
| TraesCS6D01G130600.1 | Wheat | mitochondrion | 30.25 | 44.95 |
| GSMUA_Achr5P00300_001 | Banana | cytosol, mitochondrion, nucleus | 38.27 | 44.6 |
| TraesCS4B01G016500.1 | Wheat | mitochondrion, plastid | 29.63 | 44.44 |
| Zm00001d031146_P001 | Maize | mitochondrion | 30.25 | 44.14 |
| Zm00001d010775_P001 | Maize | cytosol | 21.6 | 42.68 |
| TraesCS6B01G169500.1 | Wheat | mitochondrion | 30.25 | 41.88 |
| AT1G56150.1 | Thale cress | mitochondrion | 28.4 | 41.82 |
| KXG37892 | Sorghum | cytosol, mitochondrion | 29.01 | 41.59 |
| EES17445 | Sorghum | mitochondrion | 29.63 | 41.03 |
| TraesCS6A01G141200.1 | Wheat | mitochondrion | 30.25 | 40.83 |
| Solyc07g066560.1.1 | Tomato | mitochondrion | 31.48 | 40.48 |
| TraesCS3B01G493600.1 | Wheat | mitochondrion | 23.46 | 40.0 |
| PGSC0003DMT400057238 | Potato | mitochondrion | 31.48 | 39.53 |
| OQU84433 | Sorghum | mitochondrion, peroxisome | 29.63 | 39.02 |
| TraesCS2B01G437000.1 | Wheat | mitochondrion | 25.93 | 38.89 |
| Zm00001d036623_P001 | Maize | mitochondrion | 32.1 | 38.81 |
| TraesCS7A01G468900.1 | Wheat | mitochondrion | 31.48 | 38.35 |
| VIT_19s0085g00010.t01 | Wine grape | mitochondrion | 30.86 | 38.17 |
| Os12t0626200-01 | Rice | mitochondrion | 30.25 | 37.69 |
| TraesCS2D01G415500.1 | Wheat | mitochondrion | 27.16 | 37.61 |
| Zm00001d046986_P001 | Maize | mitochondrion | 32.1 | 37.41 |
| OQU76860 | Sorghum | mitochondrion | 32.1 | 37.41 |
| CDY69352 | Canola | mitochondrion | 29.01 | 37.3 |
| Bra001473.1-P | Field mustard | mitochondrion | 29.01 | 37.3 |
| CDX82573 | Canola | mitochondrion | 29.01 | 37.3 |
| TraesCS7A01G468600.1 | Wheat | mitochondrion | 31.48 | 36.69 |
| KRH13714 | Soybean | mitochondrion | 31.48 | 36.69 |
| Zm00001d053815_P001 | Maize | mitochondrion | 28.4 | 36.51 |
| Os06t0671150-00 | Rice | mitochondrion | 31.48 | 36.43 |
| TraesCS7D01G456100.1 | Wheat | mitochondrion | 31.48 | 36.43 |
| CDY52877 | Canola | mitochondrion | 29.63 | 36.36 |
| CDY08400 | Canola | mitochondrion | 29.63 | 36.36 |
| Bra034725.1-P | Field mustard | mitochondrion | 29.63 | 36.36 |
| CDY43398 | Canola | mitochondrion | 29.63 | 36.09 |
| TraesCS7D01G456300.1 | Wheat | mitochondrion | 29.63 | 36.09 |
| Bra039345.1-P | Field mustard | mitochondrion | 29.63 | 36.09 |
| TraesCS7B01G370400.1 | Wheat | mitochondrion | 30.86 | 35.97 |
| TraesCS7B01G370300.1 | Wheat | mitochondrion | 30.86 | 35.97 |
| TraesCS7B01G370500.1 | Wheat | mitochondrion | 30.86 | 35.97 |
| TraesCS7D01G456400.1 | Wheat | mitochondrion | 30.86 | 35.97 |
| TraesCS7D01G456500.1 | Wheat | mitochondrion | 30.86 | 35.97 |
| Zm00001d015354_P001 | Maize | mitochondrion | 27.78 | 35.71 |
| AT3G12830.1 | Thale cress | mitochondrion | 29.01 | 35.61 |
| KRH43739 | Soybean | mitochondrion | 30.25 | 35.51 |
| EES12863 | Sorghum | mitochondrion | 27.16 | 35.48 |
| TraesCS7B01G370100.1 | Wheat | mitochondrion | 30.25 | 35.25 |
| GSMUA_Achr6P31530_001 | Banana | plastid | 33.95 | 35.03 |
| HORVU6Hr1G027640.1 | Barley | plastid | 32.72 | 34.19 |
| Zm00001d026308_P001 | Maize | mitochondrion | 25.93 | 33.87 |
| TraesCS7B01G370200.1 | Wheat | mitochondrion | 29.01 | 33.81 |
| Os04t0617050-01 | Rice | cytosol, extracellular, mitochondrion | 29.01 | 33.81 |
| AT1G79130.1 | Thale cress | mitochondrion | 27.78 | 33.58 |
| CDY51000 | Canola | mitochondrion | 30.25 | 33.56 |
| Bra026717.1-P | Field mustard | mitochondrion | 30.25 | 33.56 |
| Bra026044.1-P | Field mustard | mitochondrion | 29.63 | 33.1 |
| Bra035094.1-P | Field mustard | mitochondrion | 29.01 | 32.64 |
| CDX81766 | Canola | mitochondrion | 29.01 | 31.97 |
| AT1G16510.1 | Thale cress | mitochondrion | 29.01 | 31.97 |
| CDX87405 | Canola | mitochondrion | 28.4 | 31.94 |
| TraesCS7A01G468700.1 | Wheat | mitochondrion | 22.22 | 31.58 |
| TraesCS7A01G468500.1 | Wheat | plastid | 31.48 | 28.33 |
| Zm00001d010776_P001 | Maize | cytosol | 21.6 | 28.23 |
| TraesCS7B01G370600.1 | Wheat | plastid | 30.86 | 27.32 |
| HORVU7Hr1G107340.1 | Barley | mitochondrion | 32.72 | 25.0 |
| HORVU2Hr1G098310.1 | Barley | cytosol | 19.14 | 23.31 |
| TraesCS7D01G456200.1 | Wheat | nucleus | 29.63 | 22.64 |
| CDY24242 | Canola | mitochondrion | 30.25 | 20.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P31990_001 | EnsemblPlants:GSMUA_Achr4T31990_001 | EnsemblPlantsGene:GSMUA_Achr4G31990_001 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF37 | PFAM:PF02519 | UniParc:UPI0002957F92 | UniProt:M0STW1 |
| MapMan:35.1 | : | : | : | : | : |
Description
Auxin-responsive family protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G31990_001]
Coordinates
chr4:+:28959179..28959839
Molecular Weight (calculated)
18514.5 Da
IEP (calculated)
9.854
GRAVY (calculated)
-0.451
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNVKLEGFC VVPAETYPPR RPSRHRFEAV YKYAPHLPFP PSQARMIRRM SRVADCSQCP AMRGWEKGRR PAAAAAQGHV PLHVGEEMER FEVRTELLAR
101: PAFLELLRRS AQEYGYGQRG VLRIPCPVPF FRRLLAACGS RVEEEGLLRS FDELFLSSSD PN
101: PAFLELLRRS AQEYGYGQRG VLRIPCPVPF FRRLLAACGS RVEEEGLLRS FDELFLSSSD PN
001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT
101: LRLGLADRVT
Arabidopsis Description
SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.