CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
EER95306
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	EER89430	AT4G25200.1	21798944
AT1G56150.1	EER89431	AT4G25200.1	21798944
AT1G56150.1	KXG19616	AT4G25200.1	21798944
AT1G56150.1	OQU75612	AT4G25200.1	21798944
AT1G56150.1	OQU75930	AT4G25200.1	21798944
AT1G56150.1	OQU76071	AT4G25200.1	21798944
AT1G56150.1	OQU85385	AT4G25200.1	21798944
AT1G79130.1	EER95306	AT4G33920.1	21798944
AT3G12830.1	EER95306	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031146_P001	Maize	mitochondrion	79.49	83.78
KXG37892	Sorghum	cytosol, mitochondrion	59.83	61.95
Os12t0626200-01	Rice	mitochondrion	61.54	55.38
OQU84433	Sorghum	mitochondrion, peroxisome	52.99	50.41
AT1G56150.1	Thale cress	mitochondrion	43.59	46.36
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	47.86	45.9
GSMUA_Achr9P30660_001	Banana	mitochondrion	50.43	43.7
EES12863	Sorghum	mitochondrion	43.59	41.13
OQU76860	Sorghum	mitochondrion	48.72	41.01
Bra001473.1-P	Field mustard	mitochondrion	42.73	39.68
CDX82573	Canola	mitochondrion	42.73	39.68
CDY69352	Canola	mitochondrion	42.73	39.68
CDY52877	Canola	mitochondrion	44.44	39.39
CDY08400	Canola	mitochondrion	44.44	39.39
Bra034725.1-P	Field mustard	mitochondrion	44.44	39.39
AT3G12830.1	Thale cress	mitochondrion	43.59	38.64
VIT_19s0085g00010.t01	Wine grape	mitochondrion	41.88	37.4
Solyc07g066560.1.1	Tomato	mitochondrion	40.17	37.3
PGSC0003DMT400057238	Potato	mitochondrion	40.17	36.43
CDY43398	Canola	mitochondrion	41.03	36.09
Bra039345.1-P	Field mustard	mitochondrion	41.03	36.09
KRH13714	Soybean	mitochondrion	42.73	35.97
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	41.03	34.53
KRH43739	Soybean	mitochondrion	38.46	32.61
AT1G79130.1	Thale cress	mitochondrion	36.75	32.09
GSMUA_Achr6P31530_001	Banana	plastid	41.03	30.57
CDY51000	Canola	mitochondrion	37.61	30.14
Bra026717.1-P	Field mustard	mitochondrion	37.61	30.14
AT1G16510.1	Thale cress	mitochondrion	37.61	29.93
CDX81766	Canola	mitochondrion	37.61	29.93
Bra026044.1-P	Field mustard	mitochondrion	36.75	29.66
GSMUA_Achr4P31990_001	Banana	cytosol	41.03	29.63
Bra035094.1-P	Field mustard	mitochondrion	34.19	27.78
CDX87405	Canola	mitochondrion	33.33	27.08
CDY24242	Canola	mitochondrion	41.03	19.83

Protein Annotations

EnsemblPlants:EES17445	EnsemblPlantsGene:SORBI_3008G181000	EntrezGene:8086110	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF49	PFAM:PF02519	ProteinID:EES17445	ProteinID:EES17445.1
RefSeq:XP_002443607.1	SEG:seg	UniParc:UPI0001A882B0	UniProt:C5YSI7	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr8:-:61436486..61437385

Molecular Weight (calculated)

12340.6 Da

IEP (calculated)

8.254

GRAVY (calculated)

-0.473

Length

117 amino acids

Sequence
(BLAST)

001: MRQLIRRLSR VGDCSPPPLP SSAQERRRGG KGSKAHAGVP EGHVPVHVGG GAEGAEERFL VRAEVLGAPA LADLLGRAAQ EYGYRHQGPL RIPCPVAVFR
101: RALASVAGDD DEGQDGE

Best Arabidopsis Sequence Match ( AT1G56150.1 )
(BLAST)

001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT

Arabidopsis Description

SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.