CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX72438
CDY28332
CDY49385
CDY51944

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12830.1	CDX72438	AT4G33920.1	21798944
AT3G12830.1	CDY28332	AT4G33920.1	21798944
AT3G12830.1	CDY49385	AT4G33920.1	21798944
AT3G12830.1	CDY51944	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039345.1-P	Field mustard	mitochondrion	100.0	100.0
AT3G12830.1	Thale cress	mitochondrion	86.47	87.12
CDY52877	Canola	mitochondrion	84.96	85.61
CDX82573	Canola	mitochondrion	80.45	84.92
CDY69352	Canola	mitochondrion	79.7	84.13
CDY08400	Canola	mitochondrion	83.46	84.09
VIT_19s0085g00010.t01	Wine grape	mitochondrion	60.9	61.83
Solyc07g066560.1.1	Tomato	mitochondrion	57.14	60.32
PGSC0003DMT400057238	Potato	mitochondrion	57.14	58.91
KRH13714	Soybean	mitochondrion	58.65	56.12
KRH43739	Soybean	mitochondrion	57.14	55.07
CDY24242	Canola	mitochondrion	97.74	53.72
CDY51000	Canola	mitochondrion	56.39	51.37
CDX81766	Canola	mitochondrion	54.89	49.66
CDX87405	Canola	mitochondrion	52.63	48.61
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	35.34	45.63
Zm00001d033464_P001	Maize	mitochondrion	34.59	44.66
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	40.6	44.26
TraesCS6D01G130600.1	Wheat	mitochondrion	36.09	44.04
TraesCS6A01G141200.1	Wheat	mitochondrion	39.1	43.33
TraesCS4D01G014900.1	Wheat	mitochondrion	33.08	42.72
TraesCS4A01G297200.1	Wheat	mitochondrion	33.08	42.72
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	34.59	42.59
Zm00001d031146_P001	Maize	mitochondrion	35.34	42.34
GSMUA_Achr9P30660_001	Banana	mitochondrion	42.86	42.22
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	33.83	42.06
KXG37892	Sorghum	cytosol, mitochondrion	35.34	41.59
EES17445	Sorghum	mitochondrion	36.09	41.03
TraesCS7A01G468900.1	Wheat	mitochondrion	40.6	40.6
TraesCS7B01G370500.1	Wheat	mitochondrion	42.11	40.29
TraesCS7B01G370300.1	Wheat	mitochondrion	42.11	40.29
TraesCS7B01G370200.1	Wheat	mitochondrion	42.11	40.29
TraesCS6B01G169500.1	Wheat	mitochondrion	35.34	40.17
OQU84433	Sorghum	mitochondrion, peroxisome	36.84	39.84
TraesCS7D01G456400.1	Wheat	mitochondrion	41.35	39.57
TraesCS7D01G456500.1	Wheat	mitochondrion	41.35	39.57
TraesCS7A01G468600.1	Wheat	mitochondrion	41.35	39.57
Os12t0626200-01	Rice	mitochondrion	38.35	39.23
TraesCS7D01G456300.1	Wheat	mitochondrion	39.1	39.1
TraesCS7B01G370400.1	Wheat	mitochondrion	40.6	38.85
TraesCS7B01G370100.1	Wheat	mitochondrion	40.6	38.85
TraesCS7D01G456100.1	Wheat	mitochondrion	40.6	38.57
Zm00001d053815_P001	Maize	mitochondrion	36.09	38.1
Zm00001d015354_P001	Maize	mitochondrion	36.09	38.1
TraesCS7A01G468700.1	Wheat	mitochondrion	32.33	37.72
Zm00001d046986_P001	Maize	mitochondrion	39.1	37.41
TraesCS3B01G493600.1	Wheat	mitochondrion	26.32	36.84
OQU76860	Sorghum	mitochondrion	38.35	36.69
Zm00001d036623_P001	Maize	mitochondrion	36.84	36.57
Os06t0671150-00	Rice	mitochondrion	37.59	35.71
EES12863	Sorghum	mitochondrion	33.08	35.48
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	36.84	35.25
HORVU6Hr1G027640.1	Barley	plastid	39.1	33.55
Zm00001d026308_P001	Maize	mitochondrion	30.83	33.06
TraesCS2D01G415500.1	Wheat	mitochondrion	28.57	32.48
TraesCS7A01G468500.1	Wheat	plastid	42.86	31.67
TraesCS2B01G437000.1	Wheat	mitochondrion	24.81	30.56
GSMUA_Achr6P31530_001	Banana	plastid	35.34	29.94
GSMUA_Achr4P31990_001	Banana	cytosol	36.09	29.63
TraesCS7B01G370600.1	Wheat	plastid	40.6	29.51
Zm00001d010775_P001	Maize	cytosol	17.29	28.05
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	28.57	27.34
HORVU7Hr1G107340.1	Barley	mitochondrion	42.11	26.42
TraesCS7D01G456200.1	Wheat	nucleus	41.35	25.94
HORVU2Hr1G098310.1	Barley	cytosol	22.56	22.56
Zm00001d010776_P001	Maize	cytosol	16.54	17.74

Protein Annotations

EnsemblPlants:CDY43398	EnsemblPlantsGene:GSBRNA2T00076473001	GO:A0A078I2P4	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	ProteinID:CDY43398	ProteinID:CDY43398.1
SEG:seg	UniParc:UPI000253E85B	UniProt:A0A078I2P4	MapMan:35.1	:	:

Description

BnaA01g30290DBnaA01g30290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2P4]

Coordinates

chrLK032554:+:228224..228625

Molecular Weight (calculated)

15343.6 Da

IEP (calculated)

9.109

GRAVY (calculated)

-0.292

Length

133 amino acids

Sequence
(BLAST)

001: MKYLIRRLSR VADSAHYNLL RSDSQRQSRR PESFLRSSMA RRSKKHTSCV PQGYVPVYVG EEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERVM ESLRLGLTVP SDLQDLIGDE TIF

Best Arabidopsis Sequence Match ( AT3G12830.1 )
(BLAST)

001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI

Arabidopsis Description

SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.