Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 6
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0758000-01 | |
| Os03t0207400-01 | |
| Os06t0219500-00 | |
| Os12t0580900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G56150.1 | Os02t0758000-01 | AT4G25200.1 | 21798944 |
| AT1G56150.1 | Os06t0219500-00 | AT4G25200.1 | 21798944 |
| AT1G79130.1 | Os03t0207400-01 | AT4G33920.1 | 21798944 |
| AT1G79130.1 | Os12t0580900-01 | AT4G33920.1 | 21798944 |
| AT3G12830.1 | Os03t0207400-01 | AT4G33920.1 | 21798944 |
| AT3G12830.1 | Os12t0580900-01 | AT4G33920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76860 | Sorghum | mitochondrion | 75.71 | 76.26 |
| TraesCS7A01G468900.1 | Wheat | mitochondrion | 72.14 | 75.94 |
| TraesCS7D01G456300.1 | Wheat | mitochondrion | 70.71 | 74.44 |
| TraesCS7A01G468600.1 | Wheat | mitochondrion | 73.57 | 74.1 |
| TraesCS7D01G456500.1 | Wheat | mitochondrion | 73.57 | 74.1 |
| TraesCS7D01G456400.1 | Wheat | mitochondrion | 73.57 | 74.1 |
| TraesCS7B01G370300.1 | Wheat | mitochondrion | 73.57 | 74.1 |
| TraesCS7D01G456100.1 | Wheat | mitochondrion | 72.86 | 72.86 |
| Zm00001d046986_P001 | Maize | mitochondrion | 72.14 | 72.66 |
| TraesCS7B01G370100.1 | Wheat | mitochondrion | 72.14 | 72.66 |
| TraesCS7B01G370400.1 | Wheat | mitochondrion | 71.43 | 71.94 |
| TraesCS7B01G370200.1 | Wheat | mitochondrion | 70.71 | 71.22 |
| TraesCS7B01G370500.1 | Wheat | mitochondrion | 68.57 | 69.06 |
| Zm00001d036623_P001 | Maize | mitochondrion | 65.71 | 68.66 |
| TraesCS7A01G468700.1 | Wheat | mitochondrion | 55.71 | 68.42 |
| TraesCS7B01G370600.1 | Wheat | plastid | 71.43 | 54.64 |
| TraesCS7A01G468500.1 | Wheat | plastid | 68.57 | 53.33 |
| GSMUA_Achr6P20050_001 | Banana | cytosol, mitochondrion | 43.57 | 50.0 |
| HORVU7Hr1G107340.1 | Barley | mitochondrion | 72.14 | 47.64 |
| TraesCS7D01G456200.1 | Wheat | nucleus | 70.71 | 46.7 |
| GSMUA_Achr9P30660_001 | Banana | mitochondrion | 45.0 | 46.67 |
| AT1G56150.1 | Thale cress | mitochondrion | 35.0 | 44.55 |
| Solyc07g066560.1.1 | Tomato | mitochondrion | 37.86 | 42.06 |
| PGSC0003DMT400057238 | Potato | mitochondrion | 38.57 | 41.86 |
| CDX82573 | Canola | mitochondrion | 35.71 | 39.68 |
| Bra001473.1-P | Field mustard | mitochondrion | 35.71 | 39.68 |
| CDY69352 | Canola | mitochondrion | 35.71 | 39.68 |
| AT3G12830.1 | Thale cress | mitochondrion | 37.14 | 39.39 |
| Os12t0626200-01 | Rice | mitochondrion | 36.43 | 39.23 |
| VIT_19s0085g00010.t01 | Wine grape | mitochondrion | 36.43 | 38.93 |
| AT1G79130.1 | Thale cress | mitochondrion | 36.43 | 38.06 |
| KRH43739 | Soybean | mitochondrion | 37.14 | 37.68 |
| CDY43398 | Canola | mitochondrion | 35.71 | 37.59 |
| Bra039345.1-P | Field mustard | mitochondrion | 35.71 | 37.59 |
| KRH13714 | Soybean | mitochondrion | 37.14 | 37.41 |
| GSMUA_Achr5P00300_001 | Banana | cytosol, mitochondrion, nucleus | 36.43 | 36.69 |
| Os04t0617050-01 | Rice | cytosol, extracellular, mitochondrion | 35.71 | 35.97 |
| Bra034725.1-P | Field mustard | mitochondrion | 33.57 | 35.61 |
| CDY08400 | Canola | mitochondrion | 33.57 | 35.61 |
| CDY52877 | Canola | mitochondrion | 33.57 | 35.61 |
| Bra026044.1-P | Field mustard | mitochondrion | 35.71 | 34.48 |
| Bra026717.1-P | Field mustard | mitochondrion | 35.0 | 33.56 |
| CDY51000 | Canola | mitochondrion | 35.0 | 33.56 |
| CDX81766 | Canola | mitochondrion | 35.0 | 33.33 |
| AT1G16510.1 | Thale cress | mitochondrion | 33.57 | 31.97 |
| GSMUA_Achr4P31990_001 | Banana | cytosol | 36.43 | 31.48 |
| CDX87405 | Canola | mitochondrion | 31.43 | 30.56 |
| Bra035094.1-P | Field mustard | mitochondrion | 31.43 | 30.56 |
| GSMUA_Achr6P31530_001 | Banana | plastid | 32.86 | 29.3 |
| CDY24242 | Canola | mitochondrion | 35.71 | 20.66 |
Protein Annotations
| EnsemblPlants:Os06t0671150-00 | EnsemblPlantsGene:Os06g0671150 | EntrezGene:9271403 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF37 | PFAM:PF02519 | ProteinID:BAH93678.1 | ProteinID:BAS99078.1 |
| ProteinID:EAZ37979.1 | RefSeq:XP_015642084.1 | SEG:seg | UniParc:UPI0000F197BD | UniProt:A3BEJ0 | MapMan:35.2 |
Description
SMALL AUXIN-UP RNA 25Auxin responsive SAUR protein family protein. (Os06t0671150-00)
Coordinates
chr6:-:27830245..27831323
Molecular Weight (calculated)
14650.4 Da
IEP (calculated)
7.949
GRAVY (calculated)
-0.132
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRLLRRLSR VAAADACAAA AYQPLRADRT AKLSASSSSS LAGARRLGCG ARVPEGHVPV CVGEEGGPVE RYAVRTDLLG QPAFAALLRR AAQEYGYGHP
101: GALRIPCPVA DFHQLLLRLS AAAAGDGDDD DEDGGGLVYY
101: GALRIPCPVA DFHQLLLRLS AAAAGDGDDD DEDGGGLVYY
001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE
Arabidopsis Description
SAUR40SAUR40 [Source:UniProtKB/TrEMBL;Acc:A0A178W9C0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.