CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91074
KRH28403
KRH35699
KRH77072

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79130.1	KRG91074	AT4G33920.1	21798944
AT1G79130.1	KRH28403	AT4G33920.1	21798944
AT1G79130.1	KRH35699	AT4G33920.1	21798944
AT1G79130.1	KRH77072	AT4G33920.1	21798944
AT3G12830.1	KRG91074	AT4G33920.1	21798944
AT3G12830.1	KRH28403	AT4G33920.1	21798944
AT3G12830.1	KRH35699	AT4G33920.1	21798944
AT3G12830.1	KRH77072	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43739	Soybean	mitochondrion	78.42	78.99
Bra001473.1-P	Field mustard	mitochondrion	56.12	61.9
CDX82573	Canola	mitochondrion	56.12	61.9
AT3G12830.1	Thale cress	mitochondrion	58.27	61.36
CDY69352	Canola	mitochondrion	55.4	61.11
VIT_19s0085g00010.t01	Wine grape	mitochondrion	56.83	60.31
Solyc07g066560.1.1	Tomato	mitochondrion	53.24	58.73
Bra039345.1-P	Field mustard	mitochondrion	56.12	58.65
CDY43398	Canola	mitochondrion	56.12	58.65
PGSC0003DMT400057238	Potato	mitochondrion	53.24	57.36
Bra034725.1-P	Field mustard	mitochondrion	52.52	55.3
CDY08400	Canola	mitochondrion	52.52	55.3
CDY52877	Canola	mitochondrion	52.52	55.3
Bra026717.1-P	Field mustard	mitochondrion	52.52	50.0
Bra026044.1-P	Field mustard	mitochondrion	51.8	49.66
CDY51000	Canola	mitochondrion	51.8	49.32
AT1G79130.1	Thale cress	mitochondrion	47.48	49.25
AT1G16510.1	Thale cress	mitochondrion	51.08	48.3
CDX81766	Canola	mitochondrion	50.36	47.62
TraesCS4A01G297200.1	Wheat	mitochondrion	35.25	47.57
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	35.25	47.57
TraesCS4D01G014900.1	Wheat	mitochondrion	35.25	47.57
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	41.73	47.54
Bra035094.1-P	Field mustard	mitochondrion	48.92	47.22
CDX87405	Canola	mitochondrion	48.92	47.22
Zm00001d033464_P001	Maize	mitochondrion	34.53	46.6
HORVU4Hr1G002600.1	Barley	mitochondrion, nucleus	35.25	45.79
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	35.25	45.37
GSMUA_Achr9P30660_001	Banana	mitochondrion	41.73	42.96
EES17445	Sorghum	mitochondrion	35.97	42.73
Zm00001d031146_P001	Maize	mitochondrion	33.81	42.34
TraesCS6D01G130600.1	Wheat	mitochondrion	33.09	42.2
KXG37892	Sorghum	cytosol, mitochondrion	33.81	41.59
TraesCS6A01G141200.1	Wheat	mitochondrion	35.25	40.83
OQU84433	Sorghum	mitochondrion, peroxisome	35.97	40.65
TraesCS7A01G468900.1	Wheat	mitochondrion	38.13	39.85
TraesCS7B01G370100.1	Wheat	mitochondrion	38.85	38.85
TraesCS7B01G370200.1	Wheat	mitochondrion	38.85	38.85
Zm00001d046986_P001	Maize	mitochondrion	38.85	38.85
TraesCS7A01G468600.1	Wheat	mitochondrion	38.85	38.85
TraesCS7B01G370300.1	Wheat	mitochondrion	38.85	38.85
TraesCS7B01G370500.1	Wheat	mitochondrion	38.85	38.85
TraesCS7D01G456400.1	Wheat	mitochondrion	38.85	38.85
TraesCS7A01G468700.1	Wheat	mitochondrion	31.65	38.6
TraesCS7D01G456100.1	Wheat	mitochondrion	38.85	38.57
Os12t0626200-01	Rice	mitochondrion	35.97	38.46
TraesCS7D01G456300.1	Wheat	mitochondrion	36.69	38.35
TraesCS7B01G370400.1	Wheat	mitochondrion	38.13	38.13
TraesCS7D01G456500.1	Wheat	mitochondrion	38.13	38.13
Zm00001d015354_P001	Maize	mitochondrion	34.53	38.1
Zm00001d053815_P001	Maize	mitochondrion	34.53	38.1
TraesCS6B01G169500.1	Wheat	mitochondrion	31.65	37.61
Os06t0671150-00	Rice	mitochondrion	37.41	37.14
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	36.69	36.69
OQU76860	Sorghum	mitochondrion	36.69	36.69
EES12863	Sorghum	mitochondrion	32.37	36.29
Zm00001d036623_P001	Maize	mitochondrion	34.53	35.82
TraesCS3B01G493600.1	Wheat	mitochondrion	24.46	35.79
Zm00001d026308_P001	Maize	mitochondrion	30.94	34.68
TraesCS2D01G415500.1	Wheat	mitochondrion	28.06	33.33
GSMUA_Achr6P31530_001	Banana	plastid	37.41	33.12
CDY24242	Canola	mitochondrion	56.12	32.23
GSMUA_Achr4P31990_001	Banana	cytosol	36.69	31.48
TraesCS2B01G437000.1	Wheat	mitochondrion	24.46	31.48
HORVU6Hr1G027640.1	Barley	plastid	34.53	30.97
Zm00001d010775_P001	Maize	cytosol	17.99	30.49
TraesCS7A01G468500.1	Wheat	plastid	38.85	30.0
TraesCS7B01G370600.1	Wheat	plastid	38.85	29.51
Os04t0617050-01	Rice	cytosol, extracellular, mitochondrion	29.5	29.5
HORVU7Hr1G107340.1	Barley	mitochondrion	38.85	25.47
TraesCS7D01G456200.1	Wheat	nucleus	38.13	25.0
HORVU2Hr1G098310.1	Barley	cytosol	20.86	21.8
Zm00001d010776_P001	Maize	cytosol	18.7	20.97

Protein Annotations

EMBL:ACUP02009774	EnsemblPlants:KRH13714	EnsemblPlantsGene:GLYMA_15G258800	EntrezGene:100793103	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF37	PFAM:PF02519	ProteinID:KRH13714
ProteinID:KRH13714.1	SEG:seg	UniParc:UPI0001876198	UniProt:I1MJA2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr15:+:49015597..49016722

Molecular Weight (calculated)

15888.2 Da

IEP (calculated)

9.261

GRAVY (calculated)

-0.215

Length

139 amino acids

Sequence
(BLAST)

001: MKQLIRRLSR VADSSNYTLL RADSAASQRC HHRRRRAESF RLAAAAKIRR SSAVVPEGHV PIYVGDEMER FVVCAELLNH PVFVKLLNES AQEYGYEQKG
101: VLRLPCRVFV FERVLDALRL GLDARDVAEL VNFSPEEFS

Best Arabidopsis Sequence Match ( AT3G12830.1 )
(BLAST)

001: MKQLIRRLSR VADSAQYSLL RSDSQRPSRR SESFLRSSVT RRSKKQTSSV PEGHVPVYVG DEMERFVVSA ELLNHPVFIG LLNRSAQEYG YEQKGVLQIP
101: CHVLVFERIM ESLRLGLPVP IDVQDLIGDG TI

Arabidopsis Description

SAUR72Auxin-responsive protein SAUR72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.