Factsheet for HORVU4Hr1G002600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G069380.3
HORVU5Hr1G018930.2
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56150.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT1G56150.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944
AT1G79130.1	HORVU4Hr1G069380.3	AT4G33920.1	21798944
AT1G79130.1	HORVU5Hr1G018930.2	AT4G33920.1	21798944
AT3G12830.1	HORVU4Hr1G069380.3	AT4G33920.1	21798944
AT3G12830.1	HORVU5Hr1G018930.2	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G297200.1	Wheat	mitochondrion	87.85	91.26
TraesCS4A01G297100.1	Wheat	mitochondrion, plastid	86.92	90.29
TraesCS4D01G014900.1	Wheat	mitochondrion	85.98	89.32
TraesCS4B01G016500.1	Wheat	mitochondrion, plastid	86.92	86.11
Zm00001d033464_P001	Maize	mitochondrion	69.16	71.84
KXG37892	Sorghum	cytosol, mitochondrion	67.29	63.72
GSMUA_Achr6P20050_001	Banana	cytosol, mitochondrion	53.27	46.72
GSMUA_Achr9P30660_001	Banana	mitochondrion	54.21	42.96
AT1G56150.1	Thale cress	mitochondrion	43.93	42.73
CDX82573	Canola	mitochondrion	46.73	39.68
Bra001473.1-P	Field mustard	mitochondrion	46.73	39.68
CDY69352	Canola	mitochondrion	46.73	39.68
Solyc07g066560.1.1	Tomato	mitochondrion	45.79	38.89
PGSC0003DMT400057238	Potato	mitochondrion	45.79	37.98
GSMUA_Achr5P00300_001	Banana	cytosol, mitochondrion, nucleus	48.6	37.41
AT3G12830.1	Thale cress	mitochondrion	45.79	37.12
VIT_19s0085g00010.t01	Wine grape	mitochondrion	43.93	35.88
CDY52877	Canola	mitochondrion	43.93	35.61
Bra034725.1-P	Field mustard	mitochondrion	43.93	35.61
CDY08400	Canola	mitochondrion	43.93	35.61
KRH13714	Soybean	mitochondrion	45.79	35.25
HORVU6Hr1G027640.1	Barley	plastid	50.47	34.84
GSMUA_Achr6P31530_001	Banana	plastid	50.47	34.39
CDY43398	Canola	mitochondrion	42.06	33.83
Bra039345.1-P	Field mustard	mitochondrion	42.06	33.83
KRH43739	Soybean	mitochondrion	42.99	33.33
AT1G79130.1	Thale cress	mitochondrion	40.19	32.09
GSMUA_Achr4P31990_001	Banana	cytosol	47.66	31.48
CDY51000	Canola	mitochondrion	42.06	30.82
Bra026717.1-P	Field mustard	mitochondrion	42.06	30.82
CDX81766	Canola	mitochondrion	42.06	30.61
AT1G16510.1	Thale cress	mitochondrion	41.12	29.93
Bra026044.1-P	Field mustard	mitochondrion	39.25	28.97
Bra035094.1-P	Field mustard	mitochondrion	38.32	28.47
CDX87405	Canola	mitochondrion	37.38	27.78
HORVU2Hr1G098310.1	Barley	cytosol	33.64	27.07
HORVU7Hr1G107340.1	Barley	mitochondrion	52.34	26.42
CDY24242	Canola	mitochondrion	42.99	19.01

Protein Annotations

EMBL:AK376866	EnsemblPlants:HORVU4Hr1G002600.1	EnsemblPlantsGene:HORVU4Hr1G002600	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF49	PFAM:PF02519	SEG:seg	UniParc:UPI0002009128
UniProt:F2EL38	MapMan:35.2	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EL38]

Coordinates

chrchr4H:+:4984005..4984937

Molecular Weight (calculated)

11237.4 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.326

Length

107 amino acids

Sequence
(BLAST)

001: MRHLIRRLSR VGDDSSPPAS PSPKRRGGGG GGRAAVPEGH VPVHVGDGSE AERFLVRAEL LGRPALAELL GRAAQEYGYD HQGPLRIPCC SPAAFRRALA
101: SVAADCC

Best Arabidopsis Sequence Match ( AT1G56150.1 )
(BLAST)

001: MKQLIRRLSR VADSTQYSLL RSESQRGRTK KEKHKSWVPE GHVPVYVGHE MERFVVNAEL LNHPVFVALL KQSAQEYGYE QQGVLRIPCH VLVFERILES
101: LRLGLADRVT

Arabidopsis Description

SAUR71Auxin-responsive protein SAUR71 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGU2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.