CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30665	Soybean	cytosol	98.65	98.65
KRH72837	Soybean	cytosol	96.62	96.62
KRH17206	Soybean	cytosol	96.62	96.62
KRH40705	Soybean	cytosol	95.95	95.95
GSMUA_Achr4P15590_001	Banana	cytosol	95.27	95.27
KRH53428	Soybean	cytosol	95.27	95.27
KRH64511	Soybean	cytosol	95.27	95.27
KRH68874	Soybean	cytosol	95.27	95.27
KRH15985	Soybean	cytosol	94.59	94.59
KRH18135	Soybean	cytosol	94.59	93.96
KRH45376	Soybean	cytosol	93.24	93.24
KRH24311	Soybean	cytosol	91.89	91.89
KRH29288	Soybean	cytosol	91.22	91.22
KRH00486	Soybean	cytosol	95.95	89.87
KRH33057	Soybean	cytosol, nucleus, peroxisome	89.19	89.19
KRH07669	Soybean	cytosol, nucleus, peroxisome	87.84	87.84
KRH07671	Soybean	cytosol	52.7	80.41
KRG89662	Soybean	endoplasmic reticulum	60.81	53.89
KRH26227	Soybean	cytosol	49.32	47.71
KRH55097	Soybean	endoplasmic reticulum	49.32	47.71
KRH21984	Soybean	endoplasmic reticulum, nucleus	48.65	47.06
KRH54510	Soybean	cytosol, nucleus, plastid	35.81	45.69
KRH45858	Soybean	mitochondrion, nucleus	43.92	42.76
KRH56939	Soybean	mitochondrion, nucleus	43.92	42.76
KRH63396	Soybean	mitochondrion, nucleus	43.92	42.76
KRH03443	Soybean	mitochondrion, nucleus	43.92	42.76
KRH69329	Soybean	mitochondrion	43.92	42.76
KRH74802	Soybean	mitochondrion	43.24	42.11
KRH42820	Soybean	plastid	48.65	40.91
KRG99148	Soybean	mitochondrion	33.11	37.4
KRH27335	Soybean	endoplasmic reticulum	37.16	36.42

Protein Annotations

EntrezGene:100527105	MapMan:19.2.2.5.2	Gene3D:3.10.110.10	EMBL:ACUP02010845	EnsemblPlantsGene:GLYMA_18G051400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608
InterPro:IPR016135	UniProt:K7MQ19	EnsemblPlants:KRG98118	ProteinID:KRG98118	ProteinID:KRG98118.1	PFAM:PF00179
ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF68	MetaCyc:PWY-7511	SMART:SM00212
SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0001BA8D9C	:

Description

hypothetical protein

Coordinates

chr18:+:4433782..4438576

Molecular Weight (calculated)

16446.9 Da

IEP (calculated)

8.068

GRAVY (calculated)

-0.272

Length

148 amino acids

Sequence
(BLAST)

001: MASKRIVKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYTGGVF LVSIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKAD KAKYEATARS WTQKYAMG

Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.