CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17206	Soybean	cytosol	99.32	99.32
KRH72837	Soybean	cytosol	99.32	99.32
GSMUA_Achr4P15590_001	Banana	cytosol	98.65	98.65
KRH68874	Soybean	cytosol	97.97	97.97
KRH64511	Soybean	cytosol	97.97	97.97
KRH53428	Soybean	cytosol	97.97	97.97
KRH15985	Soybean	cytosol	97.3	97.3
KRH30665	Soybean	cytosol	97.3	97.3
KRH18135	Soybean	cytosol	97.3	96.64
KRG98118	Soybean	cytosol	95.95	95.95
KRH45376	Soybean	cytosol	95.27	95.27
KRH24311	Soybean	cytosol	93.92	93.92
KRH00486	Soybean	cytosol	100.0	93.67
KRH29288	Soybean	cytosol	93.24	93.24
KRH33057	Soybean	cytosol, nucleus, peroxisome	91.89	91.89
KRH07669	Soybean	cytosol, nucleus, peroxisome	89.86	89.86
KRH07671	Soybean	cytosol	53.38	81.44
KRG89662	Soybean	endoplasmic reticulum	61.49	54.49
KRH26227	Soybean	cytosol	49.32	47.71
KRH55097	Soybean	endoplasmic reticulum	49.32	47.71
KRH21984	Soybean	endoplasmic reticulum, nucleus	48.65	47.06
KRH54510	Soybean	cytosol, nucleus, plastid	35.81	45.69
KRH45858	Soybean	mitochondrion, nucleus	43.92	42.76
KRH56939	Soybean	mitochondrion, nucleus	43.92	42.76
KRH63396	Soybean	mitochondrion, nucleus	43.92	42.76
KRH69329	Soybean	mitochondrion	43.92	42.76
KRH03443	Soybean	mitochondrion, nucleus	43.24	42.11
KRH74802	Soybean	mitochondrion	43.24	42.11
KRH42820	Soybean	plastid	48.65	40.91
KRG99148	Soybean	mitochondrion	33.78	38.17
KRH27335	Soybean	endoplasmic reticulum	36.49	35.76

Protein Annotations

EntrezGene:100802703	MapMan:19.2.2.5.2	Gene3D:3.10.110.10	EMBL:ACUP02006047	EMBL:ACUP02011451	EnsemblPlantsGene:GLYMA_09G273100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740
UniProt:I1L6Y4	InterPro:IPR000608	InterPro:IPR016135	ProteinID:KRH00484.1	ProteinID:KRH00485.1	EnsemblPlants:KRH40705
ProteinID:KRH40705	ProteinID:KRH40705.1	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068
PANTHER:PTHR24068:SF68	MetaCyc:PWY-7511	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0002338E9F	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:48940730..48945051

Molecular Weight (calculated)

16476.9 Da

IEP (calculated)

8.069

GRAVY (calculated)

-0.255

Length

148 amino acids

Sequence
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP ADSPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYEATARS WTQKYAMG

Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.