CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45376	Soybean	cytosol	83.51	54.73
VIT_19s0015g01190.t01	Wine grape	cytosol	83.51	54.73
EES13053	Sorghum	cytosol	82.47	54.05
KRH72837	Soybean	cytosol	82.47	54.05
Os04t0667800-01	Rice	cytosol	82.47	54.05
KRH17206	Soybean	cytosol	82.47	54.05
KRH07669	Soybean	cytosol, nucleus, peroxisome	82.47	54.05
Zm00001d001913_P001	Maize	cytosol	82.47	54.05
KRH30665	Soybean	cytosol	81.44	53.38
KRH40705	Soybean	cytosol	81.44	53.38
TraesCS2B01G570100.1	Wheat	cytosol	80.41	52.7
TraesCS2D01G541400.1	Wheat	cytosol	80.41	52.7
TraesCS2A01G539800.1	Wheat	cytosol	80.41	52.7
KRG98118	Soybean	cytosol	80.41	52.7
KRH15985	Soybean	cytosol	79.38	52.03
KRH68874	Soybean	cytosol	79.38	52.03
KRH64511	Soybean	cytosol	79.38	52.03
KRH33057	Soybean	cytosol, nucleus, peroxisome	79.38	52.03
KRH53428	Soybean	cytosol	79.38	52.03
KRH18135	Soybean	cytosol	78.35	51.01
GSMUA_Achr4P19400_001	Banana	cytosol	77.32	50.68
KRH24311	Soybean	cytosol	77.32	50.68
KRH00486	Soybean	cytosol	81.44	50.0
KRH29288	Soybean	cytosol	76.29	50.0
KRG89662	Soybean	endoplasmic reticulum	57.73	33.53
KRH54510	Soybean	cytosol, nucleus, plastid	38.14	31.9
KRH55097	Soybean	endoplasmic reticulum	44.33	28.1
KRH21984	Soybean	endoplasmic reticulum, nucleus	44.33	28.1
KRH26227	Soybean	cytosol	44.33	28.1
KRH42820	Soybean	plastid	46.39	25.57
KRH69329	Soybean	mitochondrion	39.18	25.0
KRH63396	Soybean	mitochondrion, nucleus	39.18	25.0
KRH03443	Soybean	mitochondrion, nucleus	39.18	25.0
KRH56939	Soybean	mitochondrion, nucleus	39.18	25.0
KRH45858	Soybean	mitochondrion, nucleus	39.18	25.0
KRG99148	Soybean	mitochondrion	32.99	24.43
KRH74802	Soybean	mitochondrion	38.14	24.34
KRH27335	Soybean	endoplasmic reticulum	35.05	22.52

Protein Annotations

EMBL:ACUP02010076	EnsemblPlants:KRH07671	EnsemblPlantsGene:GLYMA_16G103300	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR24068	PANTHER:PTHR24068:SF49	PFAM:PF00179	PFscan:PS50127
ProteinID:KRH07671	ProteinID:KRH07671.1	SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI0006EE01A4	UniProt:A0A0R0FP03
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:20910120..20911228

Molecular Weight (calculated)

11087.5 Da

IEP (calculated)

10.108

GRAVY (calculated)

-0.133

Length

97 amino acids

Sequence
(BLAST)

1: MTCSITIIGP TDNPFAGHVF LVSIHFPPDY PFKPPKVSFR TKVFHPNINS NGSIYLDILK EQWSVTLTIS KIAHMYKIKR AKYEATARSW TEKYVVG

Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.