CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45376	Soybean	cytosol	91.22	91.22
VIT_19s0015g01190.t01	Wine grape	cytosol	91.22	91.22
KRH72837	Soybean	cytosol	90.54	90.54
KRH17206	Soybean	cytosol	90.54	90.54
EES13053	Sorghum	cytosol	89.86	89.86
KRH40705	Soybean	cytosol	89.86	89.86
Os04t0667800-01	Rice	cytosol	89.86	89.86
Zm00001d001913_P001	Maize	cytosol	89.86	89.86
KRH30665	Soybean	cytosol	89.19	89.19
TraesCS2A01G539800.1	Wheat	cytosol	88.51	88.51
KRH15985	Soybean	cytosol	88.51	88.51
TraesCS2B01G570100.1	Wheat	cytosol	88.51	88.51
TraesCS2D01G541400.1	Wheat	cytosol	88.51	88.51
KRH68874	Soybean	cytosol	88.51	88.51
KRH64511	Soybean	cytosol	88.51	88.51
KRH53428	Soybean	cytosol	88.51	88.51
KRG98118	Soybean	cytosol	87.84	87.84
KRH18135	Soybean	cytosol	87.84	87.25
KRH33057	Soybean	cytosol, nucleus, peroxisome	87.16	87.16
GSMUA_Achr4P19400_001	Banana	cytosol	85.81	85.81
KRH24311	Soybean	cytosol	85.14	85.14
KRH29288	Soybean	cytosol	84.46	84.46
KRH00486	Soybean	cytosol	89.86	84.18
KRH07671	Soybean	cytosol	54.05	82.47
KRG89662	Soybean	endoplasmic reticulum	55.41	49.1
KRH55097	Soybean	endoplasmic reticulum	46.62	45.1
KRH26227	Soybean	cytosol	46.62	45.1
KRH21984	Soybean	endoplasmic reticulum, nucleus	46.62	45.1
KRH54510	Soybean	cytosol, nucleus, plastid	34.46	43.97
KRH69329	Soybean	mitochondrion	43.24	42.11
KRH03443	Soybean	mitochondrion, nucleus	43.24	42.11
KRH63396	Soybean	mitochondrion, nucleus	43.24	42.11
KRH56939	Soybean	mitochondrion, nucleus	43.24	42.11
KRH45858	Soybean	mitochondrion, nucleus	43.24	42.11
KRH74802	Soybean	mitochondrion	42.57	41.45
KRH42820	Soybean	plastid	45.27	38.07
KRG99148	Soybean	mitochondrion	32.43	36.64
KRH27335	Soybean	endoplasmic reticulum	34.46	33.77

Protein Annotations

EntrezGene:100789422	MapMan:19.2.2.5.2	Gene3D:3.10.110.10	EMBL:ACUP02010076	EnsemblPlantsGene:GLYMA_16G103100	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	UniProt:I1MML3
InterPro:IPR000608	InterPro:IPR016135	EnsemblPlants:KRH07669	ProteinID:KRH07669	ProteinID:KRH07669.1	PFAM:PF00179
ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF68	MetaCyc:PWY-7511	SMART:SM00212
SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000233B346	:

Description

hypothetical protein

Coordinates

chr16:+:20857482..20859594

Molecular Weight (calculated)

16469.9 Da

IEP (calculated)

8.476

GRAVY (calculated)

-0.222

Length

148 amino acids

Sequence
(BLAST)

001: MALKRINTEL KDLQKDPPVS CSAGPVTNDM FHWQATIMGP ANSPFAGGVF LVSIHFPPDY PFKPPKVSFR TKVFHPNINS NGSICLDILK EQWSAALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAQMYKTN RTKYEATARS WTEKYAMG

Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.