CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40705	Soybean	cytosol	93.67	100.0
KRH17206	Soybean	cytosol	93.04	99.32
KRH72837	Soybean	cytosol	93.04	99.32
GSMUA_Achr4P15590_001	Banana	cytosol	92.41	98.65
KRH68874	Soybean	cytosol	91.77	97.97
KRH64511	Soybean	cytosol	91.77	97.97
KRH53428	Soybean	cytosol	91.77	97.97
KRH15985	Soybean	cytosol	91.14	97.3
KRH30665	Soybean	cytosol	91.14	97.3
KRH18135	Soybean	cytosol	91.14	96.64
KRG98118	Soybean	cytosol	89.87	95.95
KRH45376	Soybean	cytosol	89.24	95.27
KRH24311	Soybean	cytosol	87.97	93.92
KRH29288	Soybean	cytosol	87.34	93.24
KRH33057	Soybean	cytosol, nucleus, peroxisome	86.08	91.89
KRH07669	Soybean	cytosol, nucleus, peroxisome	84.18	89.86
KRH07671	Soybean	cytosol	50.0	81.44
KRG89662	Soybean	endoplasmic reticulum	57.59	54.49
KRH26227	Soybean	cytosol	46.2	47.71
KRH55097	Soybean	endoplasmic reticulum	46.2	47.71
KRH21984	Soybean	endoplasmic reticulum, nucleus	45.57	47.06
KRH54510	Soybean	cytosol, nucleus, plastid	33.54	45.69
KRH45858	Soybean	mitochondrion, nucleus	41.14	42.76
KRH56939	Soybean	mitochondrion, nucleus	41.14	42.76
KRH63396	Soybean	mitochondrion, nucleus	41.14	42.76
KRH69329	Soybean	mitochondrion	41.14	42.76
KRH03443	Soybean	mitochondrion, nucleus	40.51	42.11
KRH74802	Soybean	mitochondrion	40.51	42.11
KRH42820	Soybean	plastid	45.57	40.91
KRG99148	Soybean	mitochondrion	31.65	38.17
KRH27335	Soybean	endoplasmic reticulum	34.18	35.76

Protein Annotations

EntrezGene:100802703	MapMan:19.2.2.5.2	Gene3D:3.10.110.10	EMBL:ACUP02011451	EnsemblPlantsGene:GLYMA_18G216000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608
InterPro:IPR016135	UniProt:K7MTV5	EnsemblPlants:KRH00486	ProteinID:KRH00486	ProteinID:KRH00486.1	PFAM:PF00179
ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF78	MetaCyc:PWY-7511	SMART:SM00212
SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000294F163	:

Description

hypothetical protein

Coordinates

chr18:-:50304283..50307294

Molecular Weight (calculated)

17588.2 Da

IEP (calculated)

7.957

GRAVY (calculated)

-0.171

Length

158 amino acids

Sequence
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAVCANTNV YFVGPVAEDM FHWQATIMGP ADSPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK
101: EQWSPALTIS KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYEATARS WTQKYAMG

Best Arabidopsis Sequence Match ( AT1G64230.3 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAEVSGHCY GTCPVAEDMF HWQATIMGPS DSPYSGGVFL VTIHFPPDYP FKPPKVAFRT KVFHPNVNSN GSICLDILKE
101: QWSPALTISK VLLSICSLLT DPNPDDPLVP EIAHMYKTDR AKYESTARSW TQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.